| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6073 |
|---|
| Symbol | |
|---|
| ID | 8729854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 7371187 |
|---|
| End bp | 7372611 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1593 |
|---|
| Protein accession | YP_003390834 |
|---|
| Protein GI | 284040904 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGC TTCTCCTCCT TGTCCTTACC CTACTATCGG ATGTGCTTGT AGCGCAGTCC
ACCAGCTCCC ATGCACGGTT AATTGTGCTG ACTGACATTG AAAATGAACC CGACGATTCG
CAGTCGCTGG TCCGGCTACT CACGTATGCC AATCAGATCG ACATCGAAGG GCTCATCGCG
ACGACCTCCA TTCACCTTCA AAAACGGGTG GCTCCGGAAA CTATTCACCG AATTGTGGAT
GCCTACGGCA AGGTGCAGCC AAACTTACTA AAACACGAGC CGGGCTACCC CACGGCGCAA
GCCTTGAAAA CCCGTATTAA AAAAGGATTG CCTGTTTATG GCATGAGCGG GGTAGGCGAA
GGCAAAGACT CGGAGGGGTC GGCCTGGATA ATCCGGCAGT TGGAAAAGAC CGACGCCCGC
CCACTTTGGG TAGCTGCCTG GGGAGGGGTC AATACGCTGG CTCAGGCCCT CTGGTTCATT
CAGAAGACGC GCACGCCCCA GGAGGCCGAG CGGATGTACC GTAAACTGCG GGTCTATACG
ATCTCCGACC AGGACGATAG CGGCCCCTGG ATCCGCAAAA TGTTTCCCCA TGTTGCTTAT
GTGGTCAGCC CTGGCTATGG CTACGATCAG GCCACCTGGT TAGGTATGAG TACGAAAGAG
CCAGGCACCC ACCCGGAGTA TGTCAGTGAC GCCTGGCTCG CGGAAAATAT TCAGCAGGGC
CACGGTCCGC TAGGAGCTTT GTATCCCGAT GTGGCCTTTG GGATGGAGGG CGATACGCCT
TCTTTTCTTG GCCTGATTCC CAACGGCTTG AATGTAGCCG AACATCCCGA CTGGGGTGGC
TGGGGCGGTC GTTATGTGCT ACAACAACCC AAAGAAGTGG TTGTCAGTAC GCGTAAACCA
GCCGGTACGC CACCCGAAGA GCCCGAAACG CGTCCCATCT GGACTAACTC GGCTGACTCA
GTCCTGACGC CGGTAACGTT TATGGCCCCG CCCAGTGGAC CAACGACCAA AAAGAGTATT
CAGGCGACTA TCTGGCGGTG GCGTAGTGAG TTTCAGAACG ATTTTGCCGC CCGTATGGAC
TGGTGTGTCA AATCCTATGC ACAGGCTAAC CATCCGCCGG TGCCGCGCCT GTCGCACCCC
GAAACTCTAA CTGTTCATTC GGGAGAGACG TTTTACCTGC GGGCCGCCGA TTCGACCGAC
CCGGACGGGG ATTCAATGAG TTTTCGCTGG ATGTACTATC CTGAAGCCAG TACGTATCAG
GGCGTAATTA ACTATGAAAA TTTTGTCTCA AACATTTATG AAGCCCGCCC CATCGCCCCG
GTGGTGACAA GTCCGCAGAC CATTCACTTT ATCCTGAAAC TAACAGACAA AGGTACTCCC
GCTCTGACGC GCTACAAACG GGTGGTTGTA ACGGTATTGC CCTAA
|
|---|
| Protein sequence | MKTLLLLVLT LLSDVLVAQS TSSHARLIVL TDIENEPDDS QSLVRLLTYA NQIDIEGLIA
TTSIHLQKRV APETIHRIVD AYGKVQPNLL KHEPGYPTAQ ALKTRIKKGL PVYGMSGVGE
GKDSEGSAWI IRQLEKTDAR PLWVAAWGGV NTLAQALWFI QKTRTPQEAE RMYRKLRVYT
ISDQDDSGPW IRKMFPHVAY VVSPGYGYDQ ATWLGMSTKE PGTHPEYVSD AWLAENIQQG
HGPLGALYPD VAFGMEGDTP SFLGLIPNGL NVAEHPDWGG WGGRYVLQQP KEVVVSTRKP
AGTPPEEPET RPIWTNSADS VLTPVTFMAP PSGPTTKKSI QATIWRWRSE FQNDFAARMD
WCVKSYAQAN HPPVPRLSHP ETLTVHSGET FYLRAADSTD PDGDSMSFRW MYYPEASTYQ
GVINYENFVS NIYEARPIAP VVTSPQTIHF ILKLTDKGTP ALTRYKRVVV TVLP
|
|---|
| |