Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5972 |
Symbol | |
ID | 8729753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7240585 |
End bp | 7242000 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003390733 |
Protein GI | 284040803 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.351131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTTCAC TTCTCCACTT TTCCAAAAGC AGGAATTCTT ATTACCCGAC CGTGTCCAAA CGTTGCCATC GGGGTCTACT ACTCAGTCTG ACATTGCTGG TTTTACTACA GGCATGTCAG GTACAGCCAA CGGACCCGGA ACCCCTAATG CCTCAGGGAA AAACGGCTGA TCTGTACAAG GGTGACATAG CAACCCAGTG GGCGGCTTTT CAATTGAAAC TGACGAAAAC AACTGCCGGA TTTACACCCC CAGTGGCCGC GAGGGCCTAT GGCTATGCAG GTCTTACCTT GTATGAAGCG GTGGTACCAG GCATAACAAC CCGGCGGTCT CTTATAGGAC AGCTCCAGGG ACTCACTGCG CTGCCACAGG CAGAGTCGGG TAAAACATAC AACTGGGCAC TAAGCGCCAA TGCAGCCGAA GCAACCATTT TACGAAGCCT TTATCCGACA ACGAGTACCG CCAATAAGAC CACGCTGGAC TCGTTGGAAA CAGCCTTACA AACGGCGTTT AAAGACACCG ACGAAACAGT AAACCAGCGC TCAATTGATT TTGGAAAGAA AATTGCTAGC GCCATTTTTG AGTGGTCTAA GTCTGATGGT GGCGACGCTG GTTATAGCCG AAACTTTCCT GCCAGCTATA TTGTGCCCAC AGGTGCCGGT CTTTGGCAAC CCACCGAAAA CGGGCAGAAA ATACCTATGC AGCCCTATTG GGGCCAGAAC AGAACGTTCG TGAAAGCCAA TAACGATCTG CCGATGCCCA AACCACTGCC CTATTCTACA GATACCAAAT CGGCAACCTT TAGCCAGTAC ATGGATGTAT ATAACAAGTC AAAGACTCTG ACTCAGACGG AGAAAGAGAT TGCTGTCTGG TGGGCCGACA ATCCTGCCGA GACGTTCACC CCTCCGGGCC ATTCCTACAA CATCGCCCGG ATTGCCGCAT CGGAAACTAA AGCCAACCTG GCAAAAGCGG TTGAAACGTT TGCGCGCACC GGCATTGCGA TAGCCGATGC CTTCACCCTC TGCTGGCGCT GCAAGTATAC CTACAACAAT ATGCGCCCTT ATACGTATGT CCGACTGGCC ATTGACCCGA ACTGGATTCC GTTCTGGCCA GCTCCTCCAT TTCCCGGTTA TCCATCAGGA CATGCCACCC AATCGTCGTC GGCAGCTACT GTGCTGACGG CTTTGTACGG AGAAAACTTT GCATTTACAG ATAACTCGCA CGTGAGTCGG GCCAAAGATG CTACCCGAAA TGTTGAGTTC AAGGCGCGGT CGTTTACGTC GTTTGCGCAG GCAGCGCAGG AATCAGCCGA TTCTCGCTTT TACGGCAACA TACACACCAA ACAGGACAAC GAAACCGGCC TGATCGAAGG GAAAAAGATA GGAGCCAACG TAAACGGGCT AACCTGGCAG AAGTAA
|
Protein sequence | MISLLHFSKS RNSYYPTVSK RCHRGLLLSL TLLVLLQACQ VQPTDPEPLM PQGKTADLYK GDIATQWAAF QLKLTKTTAG FTPPVAARAY GYAGLTLYEA VVPGITTRRS LIGQLQGLTA LPQAESGKTY NWALSANAAE ATILRSLYPT TSTANKTTLD SLETALQTAF KDTDETVNQR SIDFGKKIAS AIFEWSKSDG GDAGYSRNFP ASYIVPTGAG LWQPTENGQK IPMQPYWGQN RTFVKANNDL PMPKPLPYST DTKSATFSQY MDVYNKSKTL TQTEKEIAVW WADNPAETFT PPGHSYNIAR IAASETKANL AKAVETFART GIAIADAFTL CWRCKYTYNN MRPYTYVRLA IDPNWIPFWP APPFPGYPSG HATQSSSAAT VLTALYGENF AFTDNSHVSR AKDATRNVEF KARSFTSFAQ AAQESADSRF YGNIHTKQDN ETGLIEGKKI GANVNGLTWQ K
|
| |