Gene Slin_5853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5853 
Symbol 
ID8729628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7093500 
End bp7094147 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content54% 
IMG OID 
ProductUracil phosphoribosyltransferase 
Protein accessionYP_003390617 
Protein GI284040687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTGT TCACCCACCA GCCTTCGTTG GCCAATCAGT ACATTGCCGA ACTCCGGGAT 
GTATCTATCC AGCAGGACAG ACTTCGGTTT CGCCGAAATC TGGAAAGATT AGGGGAATTG
ATGGCGTACG AAATCTCCAA AAATTTGTCT TACCAGGCAA TTGCTGTGCA AACGCCCCTA
GGGGTTTCTC ATACGCAAGT ACTTCGGGCG CAACCTGTTC TGGCCACCAT TATGCGGGCT
GGCCTGCCCT TTCATCAGGG GTTTGCCAAC TATTTCGACC GGGCTGAGAA CGCCTTTGCG
GGGGCTTACC GGGGGTATAC GCCGGATGGA GATGATGAAT TTGAGATTGC CATGGACTAC
ATCGTGAGCC CCGACCTGAG CGGCAAAACG CTTATCCTTT GTGATCCGAT GCTGGCCACG
GGCCGTTCGC TCGAAAAAGT GTATCATGCG CTCTTACGCT ACGGAATTCC GGCCCAAACC
CACATTGCCG CTGTTATTGC CAGTCCGGAA GGCGTGCGCC ATGTGCAGCA GCAATTGCCC
CAGTGCCATT TGTGGCTAGG CGCTATCGAC GACCACCTGA ATGAGCATTC CTACATAGTA
CCCGGACTCG GTGACTCCGG CGACCTGTCC TTCGGCCCGA AAGTGTAA
 
Protein sequence
MFVFTHQPSL ANQYIAELRD VSIQQDRLRF RRNLERLGEL MAYEISKNLS YQAIAVQTPL 
GVSHTQVLRA QPVLATIMRA GLPFHQGFAN YFDRAENAFA GAYRGYTPDG DDEFEIAMDY
IVSPDLSGKT LILCDPMLAT GRSLEKVYHA LLRYGIPAQT HIAAVIASPE GVRHVQQQLP
QCHLWLGAID DHLNEHSYIV PGLGDSGDLS FGPKV