Gene Slin_5753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5753 
Symbol 
ID8729528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6997464 
End bp6998204 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content47% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003390517 
Protein GI284040587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAATA ATAAGAAGGT AATTGTCGTG ATGCCCGCCT ACCGGGCAGC CTTGACGCTG 
GAACGCACTT ACCGAGAAAT TCCGCTCGAT TTAGTCGATG ACGTCATTTT AGTTGACGAT
GCCAGCCCAG ACAATACGGT CGAAGTAGCC AGACAACTAG GTATTCGGCA TATAATCCGG
CACGACCGGA ACAAAGGCTA TGGCGGCAAT CAGAAAACCT GCTATGCCAA AGCTCTCGAA
CTTGGGGCCG ACATTGTCGT TATGCTCCAC CCCGATTATC AGTATACTCC TCTCCTATTG
CCCGCTATAA TTTCCATTAT TGGCAACGAA TTGTATCCCG TTGTGTTTGC GTCGCGTATT
CTGGGGAAAG GGGCTTTGAA AGGAGGCATG CCGATGTATA AATACATTGC CAACCGTTTC
CTGACCTTTT CGCAAAACCT GCTGATGAAT CAGAAACTGT CCGAATACCA TACCGGTTAT
CGGGCTTTTT CGGGCGAGGT CCTGCGCAGT TTGGATTTTA CCCATAACTC CGACGATTTT
ATCTTCGACA ACGAAATGGT AGCCCAGATT TTCTATAAAG GCTACGAAAT CGGCGAAGTC
ACCTGCCCTA CCAAATACTT TGAGGAAGCT TCGTCCATTA ATTTTCGGCG CAGTTCGATC
TACGGTCTTG GCGTATTACG AACCTCATTC CTCTACTTTC TAACCAAAAT CGGTGTGTTT
AACTGGAAGG TTTTGACGTA G
 
Protein sequence
MFNNKKVIVV MPAYRAALTL ERTYREIPLD LVDDVILVDD ASPDNTVEVA RQLGIRHIIR 
HDRNKGYGGN QKTCYAKALE LGADIVVMLH PDYQYTPLLL PAIISIIGNE LYPVVFASRI
LGKGALKGGM PMYKYIANRF LTFSQNLLMN QKLSEYHTGY RAFSGEVLRS LDFTHNSDDF
IFDNEMVAQI FYKGYEIGEV TCPTKYFEEA SSINFRRSSI YGLGVLRTSF LYFLTKIGVF
NWKVLT