Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5745 |
Symbol | |
ID | 8729520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6988632 |
End bp | 6989255 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | Rhomboid family protein |
Protein accession | YP_003390509 |
Protein GI | 284040579 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTA CCTTAATAAT CATCGTTGTC ACGGTTATTA TCAGTGTAGC CGCCTGGAAC AACTACAGCC TGATGAACCG GTGGATTATG AATCCCTATC AGGTAGCGAG CCGCGGGCAG TATTACCGCC TGATTACCTC TGGTTTTCTA CATGCCGACT GGGGGCATCT GTTCTTTAAT ATGCTTAGTC TGTACTTCTT CGGCGGCTTT ATTGAACAGG TATTTACCAT GCTGTTTGAG GGAAGTGGAG GGCCTTATCT CATTGGCTTT TATCTGGTGG CTATCCTGGT ATCGGATATC CCCAGTTTTC TGAAACACCG AAACGATCCT GGCTATAACT CGTTGGGGGC ATCGGGGGGC GTATCGGCCG TTATTTTCGC GGCTATTCTG TTTCGGCCTC TAACACCAAT CTACCTATAC TTTATTCCGA TTGGTATTCC GGGGTTTATT TTTGGTGCCC TGTATTTGGC TTATTCATAC TATGAGTCAC GGCGTGGTGC GGGCAATGTT AACCATGACG CTCACTTTTA CGGTGCCTTA TTCGGGGTTG TCTTCATGAT TATTGTGTAC CCCGAAGTGC TGCCCAGCTT TTTTGAGCAG ATTGCGGGCT GGCGGCTATT TTAG
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Protein sequence | MSITLIIIVV TVIISVAAWN NYSLMNRWIM NPYQVASRGQ YYRLITSGFL HADWGHLFFN MLSLYFFGGF IEQVFTMLFE GSGGPYLIGF YLVAILVSDI PSFLKHRNDP GYNSLGASGG VSAVIFAAIL FRPLTPIYLY FIPIGIPGFI FGALYLAYSY YESRRGAGNV NHDAHFYGAL FGVVFMIIVY PEVLPSFFEQ IAGWRLF
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