Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5726 |
Symbol | |
ID | 8729501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6964589 |
End bp | 6966559 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | Glycoside hydrolase 97 |
Protein accession | YP_003390490 |
Protein GI | 284040560 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.035847 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTCC CGTTGCTTAT TCTGTTTGTG AGCTACAGCC TGTCGATAGT GGCGGCCCCG CGACCGTTTC AGCGCACCAT CGCATCGCCT AATGGTCGGG TCGCGCTGAC GGTTTCGGCT ACGGACAGTG TTCGCTTTGC GGTGCGTTTT GCGGATCAGT CGCTGGTAAG TCCATCGGCT ATTGCCATGA CCCTGGGCAG CGGGCAGACG TTGGGCGCGG GGGTTCCGCA ACGCAGCCGA CTCCGTACCG TGCGGGACTC TATCCTGCCG CCCGTCGTGA CTAAACGGCG GGTTATTCGC GATCATTATA CCGAGCTAGT GCTTGAGTTC CGGGACCAAC ACGCGCTAGA GTTCCGGGTG TATGATGATG GTGTGGCGTA TCGGTTTCGT ACAGCTTTCA CCGACTCCAT TACAGTTCGG ACTGAAACAG CCCGGTTCGC GTTTGCCGAT AATCCAACCG TATATTACCC CGCCGTGCAG CCCCGCCCCG AAGTCGACCG GTTTCATACA TCCTTTGAAG AGCCGTACCA GATTCGGCCG TTGAACCAGA TGCCGGATTC AGTGCTCTGC TTTTCGCCGG TATTGCTTGC TCCCGCCAAC GGTCCCCGCG TTGTGCTGAC GGAGTCCGAT CTGTTGGATT ATCCCGGCAT GTTTCTGACC CGCAACGGCA ACGGCCTGAC CGGTATTTTT GCCCCTTATC CGCTGACCGA AAAACTGGTA GCGGCTGAGT ACTCTCAGTA CATCGTCAGT AAACGGGCCG ATTTTATTGC CCGTACTACG GGAAAACGCA CCTTTCCCTG GCGGGTGCTG GTGATTGGCA CCGACCGCGA CTTACCGGCC TCGGATATGG TGTACCGGCT CGCAACACCG AGTCGCATAG GTGATGCCTC GTGGGTGAAG CCGGGAAAGT GTACCGACGA GTGGATTACG AACATCAATC TGTACAATGT GCCGTTCCGG GCGGGAGTCA ACACGGAGAC GTACAAGTAT TACGTCGACT TCGCCAAACG GTTTGGCTTC GACCGGATTC TGCTCGATGC GGGCTGGTCG GACAACAACG ATCTGTTCAA GATTACGCCC GGCATGAACA TTCCGGAACT GGTCGCCTAC GCCCATTCGC AGGGGATTAA GCTGAGCATG TGGACACTGG CCGCTACCTT GGACCGCCAG TTGGAACCGG CCATGAAGCA GTTTCAGTCG TGGGGTGTGG ATTTCGTCAT GACCGACTTC ATGGACCGCG ACGACCAGAA GATGGTCAAT TTCTACACCC GCGTGGCCGA AGCCTGCGCC AAAGCGAAGA TCATGATTAT GTATCATGGG GCCTACAAAC CAGCGGGTTT CGAGCGGACC TACCCCAACG CCATTACCCG CGAGAGCGTG CTGGGTTCGG AATACAACAT CTGGAGCACC AAAGCCACGC CCGACCACGA TGTGCTGCTG CCGTTTATCC GCATGGTTTC TGGTCCGATG GACTACGAGC CGGGCTTGCT GAGCAACGCC ACTAAAGAGC AGTTCAGGCC CATCAGCGGG CAGGTAATGT CGCAGGGGAC GCGCTGCCAC CAGCTGGCAA TGTTTTTGGT GTACGACAGT CCCATATCTA TTTTCTCGGG AAATCCGTCG CAGGCCCTGC TGGAGCCTCG TTTTATGGAG TTTCTGGGGA GCGTGCCATC GGCGTTTGAC GAGACTAAGG TGCTGGATGC CCAACTCGGT CAATACATTG TAAGCGCCCG ACAAAAAGGC AACGACTGGT ACATTGGCGG TTTAGGCAAC TGGAGCGCCC ACGACCTTAC ACTATCGCTG GATTTTCTGG GCGATGGGGC CTACGAAGCG GTCAGTTGCA CGGATGGCCC CAACGCCGAC CGAAACCCCG TCGATTACCA GTTTAGCACC AAAACCGTAA CCCGAACGGA ATCCCTGCCG GTGCATCTGG CACCGGGTGG TGGATTTTTG ATTCGTTTGC GAAAGAAATG A
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Protein sequence | MRLPLLILFV SYSLSIVAAP RPFQRTIASP NGRVALTVSA TDSVRFAVRF ADQSLVSPSA IAMTLGSGQT LGAGVPQRSR LRTVRDSILP PVVTKRRVIR DHYTELVLEF RDQHALEFRV YDDGVAYRFR TAFTDSITVR TETARFAFAD NPTVYYPAVQ PRPEVDRFHT SFEEPYQIRP LNQMPDSVLC FSPVLLAPAN GPRVVLTESD LLDYPGMFLT RNGNGLTGIF APYPLTEKLV AAEYSQYIVS KRADFIARTT GKRTFPWRVL VIGTDRDLPA SDMVYRLATP SRIGDASWVK PGKCTDEWIT NINLYNVPFR AGVNTETYKY YVDFAKRFGF DRILLDAGWS DNNDLFKITP GMNIPELVAY AHSQGIKLSM WTLAATLDRQ LEPAMKQFQS WGVDFVMTDF MDRDDQKMVN FYTRVAEACA KAKIMIMYHG AYKPAGFERT YPNAITRESV LGSEYNIWST KATPDHDVLL PFIRMVSGPM DYEPGLLSNA TKEQFRPISG QVMSQGTRCH QLAMFLVYDS PISIFSGNPS QALLEPRFME FLGSVPSAFD ETKVLDAQLG QYIVSARQKG NDWYIGGLGN WSAHDLTLSL DFLGDGAYEA VSCTDGPNAD RNPVDYQFST KTVTRTESLP VHLAPGGGFL IRLRKK
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