| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5719 |
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| Symbol | |
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| ID | 8729494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6956467 |
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| End bp | 6957363 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | protein of unknown function DUF1080 |
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| Protein accession | YP_003390483 |
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| Protein GI | 284040553 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00753929 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGCCC GATTGATTTT ACGCAAATGC TTTCGCTTTA CTCCTTATCA AACCCTTTTC
CTCATGACAT TACGCTTACT GTCAGCCGGT ATCTGTTTGC TGATCGCTTC GTCGGTGACG
GCCCAATCGT CGGCGAAATG GCAATCGTTG TTCAACGGCA AAAACCTCAG CGGCTGGGAA
ACCTATCTGG ATAAGCCCTA CGCCAAAGAC GGCGCAAACG ATAAAATGCC CCCGCTGGGC
CTGAACAACG ACCCCAATCA TGTTTTTTCG GTCGTGACGG TCGATGGTAA ACCGGCGTTA
CGCATTTCGG GTGAGACCTT CGGCGGCATC AACACCTTGG CCGATTACGG CAATTACCAC
CTCCGAATGG AGTTTAAATG GGGAACGCAG AAATGGCCCC CCAAACTCGA CCGTCCGCGA
GACAGCGGCT TGCTGTACCA CAGCGTCGGC CCACACGGGA CGCCCATGCT TTGGATGGAG
TCGTTCGAAT TGCAGGTGCA GGAGGGCGAT TGTGGCGATT ACTGGGGCGT CATGAACGTG
CTAACCGATA TTACCGCCCG CAAAAACGAG AAAGGGTATG TGTATGACCC GGATGCTCCG
CTCGTCACCT TCCAGGACAA AACACCCATC GGACGATCGT GCCTCAAGAA CCCGGATGCC
GAGAAACCAT CCGGTCAGTG GAACGTGCTG GAGCTGTATT GTTTCGGCGA CACCTGTGTA
CACGTCATGA ACGGTAAAGT CAATCTGGTC CTGACGAAAA CACGGCACAT CGTCAACGGC
CAGGTGGAGC CGCTGACAAA GGGCAAAATC CAGATACAAT CCGAAGGGGC CGAGGTGTTC
TACCGAAATA TTCAGATTCA GGGTATTAGT CAGTTGCCGA GAGAGTTGGT GAAGTAG
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| Protein sequence | MSARLILRKC FRFTPYQTLF LMTLRLLSAG ICLLIASSVT AQSSAKWQSL FNGKNLSGWE
TYLDKPYAKD GANDKMPPLG LNNDPNHVFS VVTVDGKPAL RISGETFGGI NTLADYGNYH
LRMEFKWGTQ KWPPKLDRPR DSGLLYHSVG PHGTPMLWME SFELQVQEGD CGDYWGVMNV
LTDITARKNE KGYVYDPDAP LVTFQDKTPI GRSCLKNPDA EKPSGQWNVL ELYCFGDTCV
HVMNGKVNLV LTKTRHIVNG QVEPLTKGKI QIQSEGAEVF YRNIQIQGIS QLPRELVK
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