| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5626 |
|---|
| Symbol | |
|---|
| ID | 8729400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 6854720 |
|---|
| End bp | 6855733 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003390390 |
|---|
| Protein GI | 284040460 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.154259 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCTT TACGGCTCTT TCTTACCCCC AAAACTGGAT ACTTCGTTCT GCTGACAGGC
CTGATCATCG GTATAGAACT AGCTGTAACG CATACTGCCG GTTTTAATCG GCACCCGGTT
GCCGTATCGC TGGGGGTTGT TTTCGATTTG GTGTTCGTTA CCACGGGTTT GTTTTACTGG
CTCGTAGCAA AACCCCTTCG CCTACCCCGC AGCCGCTCCA TCCTGATAGC AGTGCTTATG
CTGCGTCTGG CGTCGTTCAT CTTACCCAAA GGCGATTTCC TACCAAACCA GTTCTGGCCA
GTCTTGTTGA TACTGACTGA GGTAATGGTA CTTATACTAG CTGGTTTACG AATTCGAACT
ATTGTGCAGA CCTATCGACG GTTGCGTCCT CATGCGGATA AAGAAACAGC CTTGCAGGGC
AGTCTGGCTG CCGTTTTTGG CCATAAAGTG GCAGCCATCA TTATGGGCGA GGGCCTTACA
CTCTATTATG TGCTGATGGG TTGGCGGCTC ACGCAAGATG TCCTACCGGG TTCAACAGCC
CTGACCACGC ATCGTCAATC AGGGCAAATT GCGCTGGTGG TTAGCCTGCT GATCGTTGGC
CTGATCGAAA CAGTTGGCGT CCATGTGCTG CTGAACCGAT GGAACCCATC AGTAGCGTTT
TGGGTAACCC TGACCAGCGT CTATGGGTTA TTGTTTTTCA TAGCCGACAT GATTGCCACC
GTCAAGCGTC CCTCCTATCT GACCGACACC CATCTTCACC TCCGCCTGGG GGTACGCTGG
CGGGCCATCG TTCCGCGCTC AGCAATAGCT AATGTCAGAC GAATTCATGA AAAACCGGTT
AAACAGTCTG GTCAACTCAA TGGTGCCTTT TTAACAGCAC CTACTATTTT GCTGACTTTC
AGCGAACCCA TTTGCTTCGA CGGGCCTTAT GGATTAAAGA AGCAGATCAG TCAATTTTCT
TTTTGTGTGG ATAATCCCGA TTCATTCGTT CAATTACTAC GGGAACGTGC CTGA
|
|---|
| Protein sequence | MASLRLFLTP KTGYFVLLTG LIIGIELAVT HTAGFNRHPV AVSLGVVFDL VFVTTGLFYW
LVAKPLRLPR SRSILIAVLM LRLASFILPK GDFLPNQFWP VLLILTEVMV LILAGLRIRT
IVQTYRRLRP HADKETALQG SLAAVFGHKV AAIIMGEGLT LYYVLMGWRL TQDVLPGSTA
LTTHRQSGQI ALVVSLLIVG LIETVGVHVL LNRWNPSVAF WVTLTSVYGL LFFIADMIAT
VKRPSYLTDT HLHLRLGVRW RAIVPRSAIA NVRRIHEKPV KQSGQLNGAF LTAPTILLTF
SEPICFDGPY GLKKQISQFS FCVDNPDSFV QLLRERA
|
|---|
| |