| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5529 |
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| Symbol | |
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| ID | 8729302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6738860 |
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| End bp | 6741547 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_003390294 |
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| Protein GI | 284040364 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0965333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCAA AGACATACGC CCCCCAGGAA ATCGAGGAAA AATGGTATCA ATATTGGCTT
GATAACCAAT TTTTTAAATC TACGCCCGAC CCGGAGAAAG AGCCATATAC CATCGTTATT
CCTCCCCCAA ACGTGACGGG TGTGCTGCAT ATGGGCCATA TGCTCAATAA TACCATTCAG
GATGTGCTGG TCCGGAAAGC ACGTATGGAA GGTAAAAACG CCTGCTGGGT ACCCGGCACC
GACCACGCCA GTATTGCGAC CGAAGCGAAA GTGGTGGCCA TGCTGAAGGA ACGGGGCATT
AGCAAGAAAG ACCTGACCCG TGAGGAGTTC CTGGAATACG CCTGGGAATG GACGCATAAG
TATGGCGGTA TCATTCTGTC GCAGTTGCGT AAACTCGGCG CTTCCTGCGA CTGGGACCGT
ACACGCTTTA CGATGGAACC GGCTCTGCAC GATTCCGTTA TCGACGTGTT CGTCGACCTC
TACGAAAAGG GACAGATATA CCGGGGCGTT CGGATGGTAA ACTGGGACCC ACAAGGGCGC
ACGGCCGTAT CCGACGAGGA AGTTATCACT AAAGAAATTC AGCAGAAACT CGTTTACATC
CGCTACGAAA TAGCCGGAAG CAACGGACAG GATGCGATTA CTATTGCCAC CGTTCGGCCG
GAAACGATCA TGGCCGATGC GGCTATTGCG GTTAACCCCA ACGACGAACG ATACAAGCAC
CTGCACGGCC GCAAAGCCAT TATTCCGCTT ATCAACCGCG AAATTCCCAT CATCACGGAT
GAGTATGTAA CGATGGATTT TGGAACGGGG GGCTTGAAAG TGACCCCGGC CCACGACCCT
AATGACTACG CGCTGGGTAT TACGCATAAC CTGCCCGTTC TGGACATCCT TAACGACGAT
GGTACGCTGA ACGAGAAGGC GCAGATTTTG GTCGGGATGG ACCGCTTTGC CGCCCGGAAA
GCCATTATCA AATTACTGGA AGAGTCCGGC AATCTGGAGA AAACCGAAGA GTACAAATCG
AACGTTGGTA CGTCGGAACG GACCGGTGCC GTTATTGAGC CGAAGCTATC GCTGCAGTGG
TTCCTGAAAA TGGATGAACT GTCGAAACCC GCGCTGAAGA ATGTGATGGA CGATACCATT
CAACTGGTGC CGCCCAAATT CAAGAATATG TACCGGTCCT GGATGGAGAA CGTACATGAT
TGGTGCATCA GCCGTCAGCT TTGGTGGGGA CAGCGCATTC CGGCGTTTTA TATGCAGGAT
GGTACCATAA TCGTCGCTAG AAACAAGCAT GAAGCACTAG AGAAAGTACA GCACGAGAAA
CTCTTGTTCG CCATGACCGA GGCCGATTTG ACGCAGGACG AAGATGTACT CGATACCTGG
TTCTCGTCGT GGCTCTGGCC AATGTCAGTG TTCGACGGTC TGAAAGACCC GAACAACGCC
GACATCAACT ACTATTACCC AACCAACGAC CTCGTTACGG CTCCCGAAAT TCTGTTTTTC
TGGGTAGCCC GGATGATTAT TGCCGGATAC GAATACCGGG GCGAAGCACC GTTCAAGAAC
GTGTACCTAA CGGGTATTGT CCGCGATAAG CTGGGTCGTA AAATGTCGAA GTCGCTGGGT
AACTCACCGG ACCCGCTCGA TCTCATCGAC CAGTACGGCG CTGATGGTGT TCGTACGGGT
ATGCTCTTCA GTTCGGCCGC CGGAAACGAC CTGATGTTCG ATGAAAAGCT GGTGGAACAA
GGACGAAATT TCAGCAACAA AGTCTGGAAT GCCTTCCGAT TGGTGAAAGG ATGGACGGTG
GCCGACGCGA ACAATAACGA TAATGTAGAG ACAAGGCATG CGTTGTCTCT ACCCATTCAA
TGGTTTGAAT CCAAATTGAA CGCAACGTTA ATTCAGATTG AGGACGATTT CAGCAAATTC
CGGATTTCGG ATGCATTACA AGCTGTTTAC AAACTGATTT GGGATGACTT CTGCTCGCAG
TATCTTGAAC TGATCAAACC CCCGTTTGAT GCAGTAACGG GTACCTCACA CCCCATTGAC
AAGGCCACGT ACGAGGCTAC CATTAACTTC TTCGAGCGGC TAATGGGACT GGCTCATCCG
TTCATGCCGT TTATTACGGA GGAAATTTGG CAGGACATTC GCGAACGACA AGCGGGCGAA
AGCATTTGTA TCTCGTCGTT TCCGAAGGCC GGTACTGTGG ATAGCCAGGT TCTGACTGAT
TTCGACACCT TATTTGAGAT AATCTCAAAT ATTCGGAACA TTCGGAACGC AAAACAGATT
TCGCCTAAAA CAGAACTTCC ACTGGCTATT AAAACGAGCA CACCCGAGCG GTTTGGCAAG
CTGGAAGCCT TGGTGCAGAA AATGGCCAAT GTCTCGGCGA TCAGTTATGT AAATGAGCAA
GGTGCTAGTG AAGCCGCTTC TGGACTGGCA CTCTCGTTTC TGATTAAAGG CGATGAGTAC
TTTGTAAATA TTGCCGGTGA AATTGACGTT GAGCAGGAAA TTGTCAGCAC ACGTAAAGAA
CTGGAATACA ACATTGGTTT CCGCGAGTCA ACGCTCAAGA AGCTGTCGAA CGAGAAGTTT
GTTGCCAATG CCAAACCCGA ACTGGTTGAC CGTGAACGTC AAAAACTAGC AGATGCCGAG
GCCAAAATAC AGGCACTGGA GCAACGATTG AAGGATTTAA GCGTATAG
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| Protein sequence | MISKTYAPQE IEEKWYQYWL DNQFFKSTPD PEKEPYTIVI PPPNVTGVLH MGHMLNNTIQ
DVLVRKARME GKNACWVPGT DHASIATEAK VVAMLKERGI SKKDLTREEF LEYAWEWTHK
YGGIILSQLR KLGASCDWDR TRFTMEPALH DSVIDVFVDL YEKGQIYRGV RMVNWDPQGR
TAVSDEEVIT KEIQQKLVYI RYEIAGSNGQ DAITIATVRP ETIMADAAIA VNPNDERYKH
LHGRKAIIPL INREIPIITD EYVTMDFGTG GLKVTPAHDP NDYALGITHN LPVLDILNDD
GTLNEKAQIL VGMDRFAARK AIIKLLEESG NLEKTEEYKS NVGTSERTGA VIEPKLSLQW
FLKMDELSKP ALKNVMDDTI QLVPPKFKNM YRSWMENVHD WCISRQLWWG QRIPAFYMQD
GTIIVARNKH EALEKVQHEK LLFAMTEADL TQDEDVLDTW FSSWLWPMSV FDGLKDPNNA
DINYYYPTND LVTAPEILFF WVARMIIAGY EYRGEAPFKN VYLTGIVRDK LGRKMSKSLG
NSPDPLDLID QYGADGVRTG MLFSSAAGND LMFDEKLVEQ GRNFSNKVWN AFRLVKGWTV
ADANNNDNVE TRHALSLPIQ WFESKLNATL IQIEDDFSKF RISDALQAVY KLIWDDFCSQ
YLELIKPPFD AVTGTSHPID KATYEATINF FERLMGLAHP FMPFITEEIW QDIRERQAGE
SICISSFPKA GTVDSQVLTD FDTLFEIISN IRNIRNAKQI SPKTELPLAI KTSTPERFGK
LEALVQKMAN VSAISYVNEQ GASEAASGLA LSFLIKGDEY FVNIAGEIDV EQEIVSTRKE
LEYNIGFRES TLKKLSNEKF VANAKPELVD RERQKLADAE AKIQALEQRL KDLSV
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