Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5505 |
Symbol | |
ID | 8729273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6700141 |
End bp | 6701268 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003390270 |
Protein GI | 284040340 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.37122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAT ACTACGCAAT TGCCCTGGTG ACCTTATTAG CGGCCTGCTC GGGAGAAAAG AAAACAGATG TACAGGGTAA ACGGGAGGAA CTGACCGAGC TGAAGTCCCA GCAAACGGAG CTGACCACCA AAATCAAGAC GCTGGAGGCT GAACTGGCAA AACTTGAGCC GAAGAAACAG GAAGATGTAC GCGTTAAAGA TGTAACGGTG TCGCCGGTAG CTGCCACAAC GTTTAAGCAT TTTGTAGAGT TACAGGGTAC GATCGATGCG AAAAATAACG TGCAGGTATC GCCGAAATCG GGCGGTGTTG TAACGGCGGT TTATGTAAAA GAAGGCGATC AGGTGCGGGC CGGACAGGCG ATTGCAAAAA TTGACGATCA ACTGCTGCGG GAATCGATGG CCGAGGTGAA AACCCAGCTA TCACTGGTAA CTACGGTTTA TGAAAAGCAG GCGGCTTTGT GGAATCAGCA GATCGGTACG GAAATTCAGT ACCTACAGGC GAAGAACAAC AAAGAATCGC TCGAACGCCG ATTGGCCACC CTCAATGCGC AACTAGGCCA GTCAACGGTA ACAGCGCCGA TCTCCGGAGT TGTGGATCAG GTAATGGTCA AAATCGGCCA GTCGGCAGCG CCGGGAATGG GCCTGGTTCG GGTTGTGAAT TTAGCCCAGC TGAAAGTGGT GGCTAAAGTG TCTGATACCT ATTCGGGAAG TGTTCATAAA GGTGATGTCG TATTAATTGA CTTTCCGGAC TTACAGAAAA GCCTGAACTC GCGCATTTCC TTTGTGGCAA CAACGGTTGA CCCGCTAACC CGGACGTTCA CCATTGAGGC CCCTCTCCCA TCCGACAATG CGCTGAAACC AAATATGCTC GCACGGATCA AAATCAACGA CGAAACAAAA GCGAATGCCA TTGTGATCAA CCAAAACCTT ATTCAAAGTA CAGAAAACGG GCAACTGGTT TATGTAGCGG TGAGTGAAGG TAGCAAGAAA GTAGCCAAAG CACGGCCCAT CAAAACCGGA CCGTCGTATG GCGGTCAGAT TGCTATCACG CAGGGATTAC AGGCCGGTGA CCAGATCGTT ACCACAGGCT ATCAGGATTT GGTTGACGGA CAGGCGATCA ATTTTTAA
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Protein sequence | MKPYYAIALV TLLAACSGEK KTDVQGKREE LTELKSQQTE LTTKIKTLEA ELAKLEPKKQ EDVRVKDVTV SPVAATTFKH FVELQGTIDA KNNVQVSPKS GGVVTAVYVK EGDQVRAGQA IAKIDDQLLR ESMAEVKTQL SLVTTVYEKQ AALWNQQIGT EIQYLQAKNN KESLERRLAT LNAQLGQSTV TAPISGVVDQ VMVKIGQSAA PGMGLVRVVN LAQLKVVAKV SDTYSGSVHK GDVVLIDFPD LQKSLNSRIS FVATTVDPLT RTFTIEAPLP SDNALKPNML ARIKINDETK ANAIVINQNL IQSTENGQLV YVAVSEGSKK VAKARPIKTG PSYGGQIAIT QGLQAGDQIV TTGYQDLVDG QAINF
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