| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5484 |
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| Symbol | |
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| ID | 8729252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6667716 |
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| End bp | 6674237 |
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| Gene Length | 6522 bp |
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| Protein Length | 2173 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | alpha-2-macroglobulin domain protein |
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| Protein accession | YP_003390249 |
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| Protein GI | 284040319 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.468483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACGT ATCTGTCTTT TTTTTTCGTG CTGGTCGCTA TGGCGGCATC CGCACAAAAC
CGTCCACAAC CCAATTATAC CCGCGACTGG AAACGGGCCG ACTCGCTGGT GGCTAAAGGA
TTACCCAAAT CAGCCCTCTA CATCGCCAAT CGGATTTATA AAGAAGCCAA AGCTCAGAAG
AATTACCCAC AGGTGGCCAA AGCGGCTATG GCCCGGCAGG TGTTCCGAAG TTTTTCGGAT
GAGGATTCGT ATGTCGAACT CGTTCGTTCG CTGAATACCG ATATTCAGGA CACGCCCGAA
CCGGCCAAGT CTGTCCTGCA ATCAGTGCTG GCCGACATCT ACTGGCAGTA CTTCCAGCAA
AACCGGTACA AGTTTTATAG CCGGGCCACG ACAGGCCGCG CCACGGGCGG AAAAGTTGCT
GCCGGAAAAC CCTCACAAGG AAACAAAGCC ACTGAAACGC CCGCCGATTC GACGGATGCC
GATTTTACCA CCTGTGATGC CCCGCATCTG ATCGGGGTGA TTACATCGGC TTATCTGGCC
TCTGTTCACG ACAAAGCGCT GTTACAGAAA ACGCCCGTTG CCGAGTACGA TGTCCTGATC
GACAAAGGCG ATGCCGACGC CCGTCCGCTT CGACCAACGT TGTATGATCT GCTGGCCCAC
CGCGCCATTG GTTTCTTCCA GAATACCGAG CCCGATTTAC TGAAGCCGGT CTTTAAATTC
GAGCTGAACC AGCCCGCTTT CTTTGCCGGG CCAGCGGAGT TTGCCAAACT ATCCATCCAG
AGTCAGGATT CCTTGTCGGG CCGTTATCAG GCACTGTTAC TCTATCAGCA ACTGGTGGCT
TTCCATTTGT CGGATACAAA CCCCGATGCA CTCGCGGATG TCGATGCCCT CCGGCTGGCG
TTTGTGCATC GGCATAGCGT GCTGCCGGAT AAAGATACGC TGTATCAGCA GACGCTGGAA
AAGCAGATTA CCATCTATAA AGGCAAACCC GCCGAAGCGG TTTATGGGTA TCAACTGGCT
CAGTTTCTGA GCGGTCGGGG TGCGCCGGTT CGCCCGCTGG ACGAAGACGA GGATGCCAGT
GAGACCAAAC CCGATCCGTT TCGCTGGAAT CGAAAACGAG CCGCTGACAT TTGCCGGGAC
TTAATAAAAC GGTTTCCGAA TACGCTGGCT CGTAAACAGG CCGACGTGTT GCTGACCCAA
TTGCTGGCAA GTTCGTACTC TGTACAGATT GAAAGTGTGA ACGTACCGGA AAAGCCATTT
CGGGCGCTGG TCAACTACCA GAATACCCCG ACGATCACCT ATCGCGTTAT TCGGTTGTCG
TTGGCTGAAG TGCAGGAGCC GCTAAACCGG TCTGACAACT GGGAAGAGCA GCGGAAAAGA
AGGCTCAGCA AGTGGCTAAA GCGACCGGTT GCTATCGAAA AGTCGGTAGT GCTCCCCGAT
GATGGCGATC TGAACGGTCA TTCGGTAGAA ATACCGGTAG CAGGTTTGCC CGTTGGTCAG
TATGCGCTTG TCGTTACTAC GGGAAACACC TTTAGCGAAA CGTCGGAACA TACCCAGCTA
TCACTTTTTA CGGTGTCGGC ACTGAGCTAT TTGGCCCGTC AGGATAATCG AAGCGATAAG
CCACAAACGT TATCGGTCAT GAACCGGACC ACGGGTGCGC CCATGCCAAA CGTGTCGGTA
ACGCTGGTTG ATGTTGAAAA TTTCAGGCTG ACAACCCCCA AAAAGGCATT TATGACCGAT
GCCAACGGCT TGCTTGCTCT CAGCGAAAAA GAAACACCTG CGGCCCAGCA GTTCGGCTAT
CTGATGGTGT CAGGTCGTGA CACCCTGCTT TCCGGTACGC TATATAACTA CAACTACCCA
CCGCAGCCTG AAAGGGAGCA AACCCACGCG CGATTGTTCA CCGACCGCGC CATCTACCGC
CCCGGCCAGC CAATTTATGT GAAAGGACTG CTCTACGGCG GCAAGGCGAA TCAATATGCC
GTGCTGGCCA ATGAAGAGGT AGACGTCGAA TTTTTGGACC AGAATGGCGA GCGGATAGCC
GAGAAAACGC TTAAAACGAA CGAGTTTGGT ACGTTCGAGG CTACGTTTAC GGCACCGGTT
GGGCGGCTCA CAGGAGCTAT GACCATTAGC ACTGATGACG GAAGCGTCAG CATTCGGGTT
GAAGAGTACA AACGCCCGAC CTTCGAGGTG AAGGTCGATC CCATAAAACA GTCGTTCAAA
CTGGAGCAGA TTGTTACGCT CTCCGCGTCA GCCAAAACGT TTTCGGGAGC CGTGGTCGAT
GGGGCTGAGG TGCGGTATCG TGTCGTGCGG AGTCTGCGGC CACGCTGGGA GTGGTGGTAT
GGCTATCGTG GTAGTGGCCG ACCCGTCAGC CAGGCTGAAA TTGCCAGCGG CACAGCACAA
ACCGATGCCC AGGGGAATGT ACGCATCACC TTCCCGGCCA CACCCGACCG GGAGCAGGCT
CGCGAAACGA ACCCTGTTTT CGATTTCGAG CTAACAATCG ACGTGACCGA CCGCGCAGGC
GAAACCCGGA CGGCGACAAA AACGCTGCGT ATTGGCTACT CGGCCATACA GATCAGTCTG
GGCATTCCGC CCCAACTGGA GAGTAACACA CCAGCGACTT TTCCGGTAAC TATCACCAAC
CAGTCCGGCG AGAAAGTAGC GGCAAAAGGG CAATTGATCG TGTACCGGCT GCAACCGCCC
GCCCGCCACT TGCGCAACCG GCTGTGGAGC CGCCCCGACC GGCAGTTCCT GAACCGGGAG
GAATTTGAAC GGCTGTTCCC GAACGATCTG TATGCCAACG AAAACGACCC GCGCTACTGG
CCGAAGGGCG ATGTGGTGCA GCAACAAACT ATTACCAGTC CGGCCGATTC GCTGGTAAAA
CCCGACCTCA GCCACTACAC GCCCGGCGTA TATGTGGCCG AATTGACGGT GACGGATGCC
AATGGGGAGA CGGCGAAGGA GCTAGCCTTT TTTGCCGTTG TCAACGATAA ACAGCCAACG
GCATCAGCAA GGCCGGAGAA TTGGGTACAG GTGCGGAAAG CCACCGCCGA ACCCGGTGAG
GAAGCTGTTT TCTGGGTAGG CAACAGTCGG CCCGGCGAGT TAAACTGGGT TTTGATGAGC
GTTGAAGAAA ACCAGACGAT TGTGCGGAAC GAGTGGCTGA AAATAGAAGA CCGCCCCCGC
CGGGTTACCC TGCCCGTTAC CGAAAAACAA CGGGGTGGCT TTGCCGTACA CTTCGCTATG
GTGCAGAATG GCCGGTTGTA TGAGAAATCG CAGACCATTA CGGTGCCATT TACCAATAAA
GAACTGAAGA TCGAAACGCA GACCTTCCGC AATAAACTGA AGCCCGGCGA GCGGGAGGAG
TGGACGCTGA AAATTAGTGG CCTGGATAAA AAACCAGCCG AGCTTGTCGC CACACTATAC
GATGCCTCAC TGGATATTTT CGACCGGCTC AACTGGCAAA CATCGTTCTA TCAACCCTAT
TCACCAGCTT TCGGTAGTTG GGCGTCGCAG GCGTTTGGTG TGCAGGGTAG CCAGGCACTG
GCATACCGCT ATCGTCCGCA GCCGACGGCT CCTGAGCGTC AGTATGACCA GTTAAACTGG
CTGGGGTATC GGTTCAGTAT ATATGGTAGT CGCCCCTTTG GGCTGGCTCC GCTGAAGGTG
TCGAATGACG CCATTCGGAT AAGTATCAGC CGGACCGGCA AAACGATTAC CGGAACGGCG
ACGTATAAAG ATGGATCGGT GGCACCGGGC ATAAGCGTAT TGGTAAAAGG AACCGATAAA
GGGGCCGTTT CGGATGCACT GGGCAAGTTC TCGATCAACA CGGCTCCTAC GAGCAAAGAA
GTAACCCTTA TATTCTCTTG GGTGGGCTAT AAAGCGCAGG AAGTCGTGCT TGCGCAGAAG
TCGAAGTCGT TTCAACTAAT GCCTGATGCG ATGGCCCTGA ACGAAGTTGT CGTGACCGCC
TATAGCACAC AGAGCAGGAG GGAAGTTACG GGTGCTGTGG CGAAGATGGC GGCACCTATG
GCGGCAGCCA CTTTAAATCA ATTTATTAGT AATGACTTGT CATTAGCACC TGCACAAGCG
GGTAGTGGTT CGCCGGGACA GCAACCTGTT GTCCCCATCA CCCCCCGCAA AAACTTCAGC
GAGACGGCCT TCTTTATGCC GCAGATGCAG ACAGATAAAG ACGGGCGGCT GGTGCTTAGA
TTCACCATGC CCGAAGCCCT GACCCGCTGG CGGCTGCTGG CGTTTGCGCA TACGAAAGAT
ATGAAAACCG GTATGCTGGA ACGGGAGATC ATCACGCAGA AAGAACTGAT GATCACGGCC
AATGCGCCCC GTTTCTTCCG CGAGGGCGAC ACTATCCGGG TATCGGCTCG TATCAACAAC
CTGAGCGACA AAAGCTTGTC CGTACTAGCT AGCCTGTCGC TGCTGGACGC CCTCACCGGC
GAACCGATCC ACCAGAAGCT CAAGCTGACC AATCCTCAAA CGAATGTTTT GGTAGCCGCC
GGACAGGGGC AGGCCGTGGG CTGGACGCTG ATCGTTCCGG CCAATCTGGA CGCCGTCACC
TGCCGCCTAA CGGCCCAGTC GGGGAGCTTT ACCGATGGCG AAGAGTTTAC CGTACCCGTG
TTGCCCAACC GCATGTTGGT GACCGATACG AAGCCGTTTT GGGTCAACGG TAAAGAAACG
AAATCGTTTA CCCTGAAGCC GTTAGCCAAT CTGAACCCCG AACTACCCGT TCAGCATGAG
CGGCTCACGG TGGAGGTGAC CAGCAACCCG AGCTGGTACG CGCTGCAATC GCTGCCGTAT
CTGATGGAGT ACCGCTACGA ATGTGCCGAG CAACTGTTTA GCCGACTCTA TGCCAACAGT
CTGGCGGCCC ATATTGTCGG GAGCAAACCG GCTTTCAAAC AGGTGATTGC CGAGTGGCAG
AAAACCCGGA ACGCCGGACC GCCCCCCCGC AACCCACTTC AGTCGAACGA AGAGTTGAAG
GCCGTTACGC TGGAAAACTC GCCTTGGCTG GCCGATGCCC GCTTAGAAAC CGAACGTCAG
GCAAAACTCG GTCAGTTGCT GGATGCCAAT CGGATGGAAA GCGAGCAGGT TCAGGCGTTT
GAGAAACTGA AACAATTACA GACAGCCGGC GGGGGCTTCC GTTGGTTCGG TGGTATGGAG
CCCGATCTGT CCATGACGCT GCACATCCTG AGCGGACTGG GTCACTTACA AAAGCTGGGC
GTCAAATTCC CGGCCGATTT GCAAACCAAA CTAACTGATA TGCAAAGCAG CGCCATCCAA
TATGTCGATG GTAAGATGAA GCAATGGGTT ACGGAGCAAA AGAAGCTGGA AGAGCAGAAG
AAAGGCAAAC TTGTTGGTGA ATGGTATTTC TCGGCCACGC AGTATCTCTA CGCTCGTAGT
TTCTACCTCG ATCAGCCGGT CGATAAAGAC GTGCTGGCTT ACCTGAAGCC GCAGGTGGCT
AACAACTGGC TAGCGCAAAG TTTACAGGGG CAAGCCTTGT CGGCGATGGC ACTCAACCGG
TTTGGCGATA CCAAAACGGC GGCTGGTATT CTGCAATCCT TGTTGGAGCA TTCGAAAATG
TCCGAAGAAA TGGGACTCTA CTGGCCCGAT AACACCAGTG GATTATACTG GTATCAAACG
CCCATCGAAA CGCAGGCGTA TCTGATCGAG ATGATCGACG AAGTGGGACA TACTCCACAG
GGCATGGCCT GTTTTGACTG GCTGGGCCAG CAATCGAAGC GCACGCTGGG CCCTCAAATC
GTCGTTGACG AAATGAAACG CTGGCTCCTG CGGCAGAAAC AAACCCAATC GTGGTCCTCC
ACCAAAGCCA CGACAGAGGC CGTTTACGCG TTGCTGCTAC GGGGTAGCGA CTGGCTCGGA
ACGGGCGTCA GCACGCAGGT TACGCTGGGC GGAAAATCTA TCCAGAACCG CGTGTCGAAG
TCAGACGCCA TTACAGGCTA CGAGAAAGTG ACCTATGCCG CTTCCGAGAT AAAACCGGAA
ATGGGCGCGA TTCAAATCAC AAAGACAAGC GATGGTCCAG CCTGGGGCGC TTTATACTGG
CAGCACTTCG AACCGCTCGA TCAGGTCATG CCGGGCAGTG CGGGCTTATC GGTTCAAAAA
ACGCTTTATG TGCAACGCGA CTCGCCTGGC GGTCCGGTCA TATCAACGGT CGCGTCGCAA
TCGGCCCTCA AACCGGGCGA TCTGGTCAAA GTCCGGCTCG TGCTCAAAAC CGACCGGGCA
ATGGAGTATG TGCATTTGAA AGATGGCCGG GCATCGGGTT TCGAACCCGT GGCAGCACTC
TCGGGCTACA AATACCAGAA CGGACTCGGC TATTACGAAT CCCCCCGCGA CGCCAGCACT
GATTTTTTCA TGAATTACCT GCCCGTGGGT ACGCACGTGT TCGAGTATGA CCTCCGCGTG
GCCCAGTCCG GCGATTTCTC GGCGGGTGTT GCTACGGTTC AATGCTTCTA CGCCCCCGAG
TTCTCGGCCC ATTCGGCGGG TGAGCGGGTG CGGGTGAAGT AG
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| Protein sequence | MHTYLSFFFV LVAMAASAQN RPQPNYTRDW KRADSLVAKG LPKSALYIAN RIYKEAKAQK
NYPQVAKAAM ARQVFRSFSD EDSYVELVRS LNTDIQDTPE PAKSVLQSVL ADIYWQYFQQ
NRYKFYSRAT TGRATGGKVA AGKPSQGNKA TETPADSTDA DFTTCDAPHL IGVITSAYLA
SVHDKALLQK TPVAEYDVLI DKGDADARPL RPTLYDLLAH RAIGFFQNTE PDLLKPVFKF
ELNQPAFFAG PAEFAKLSIQ SQDSLSGRYQ ALLLYQQLVA FHLSDTNPDA LADVDALRLA
FVHRHSVLPD KDTLYQQTLE KQITIYKGKP AEAVYGYQLA QFLSGRGAPV RPLDEDEDAS
ETKPDPFRWN RKRAADICRD LIKRFPNTLA RKQADVLLTQ LLASSYSVQI ESVNVPEKPF
RALVNYQNTP TITYRVIRLS LAEVQEPLNR SDNWEEQRKR RLSKWLKRPV AIEKSVVLPD
DGDLNGHSVE IPVAGLPVGQ YALVVTTGNT FSETSEHTQL SLFTVSALSY LARQDNRSDK
PQTLSVMNRT TGAPMPNVSV TLVDVENFRL TTPKKAFMTD ANGLLALSEK ETPAAQQFGY
LMVSGRDTLL SGTLYNYNYP PQPEREQTHA RLFTDRAIYR PGQPIYVKGL LYGGKANQYA
VLANEEVDVE FLDQNGERIA EKTLKTNEFG TFEATFTAPV GRLTGAMTIS TDDGSVSIRV
EEYKRPTFEV KVDPIKQSFK LEQIVTLSAS AKTFSGAVVD GAEVRYRVVR SLRPRWEWWY
GYRGSGRPVS QAEIASGTAQ TDAQGNVRIT FPATPDREQA RETNPVFDFE LTIDVTDRAG
ETRTATKTLR IGYSAIQISL GIPPQLESNT PATFPVTITN QSGEKVAAKG QLIVYRLQPP
ARHLRNRLWS RPDRQFLNRE EFERLFPNDL YANENDPRYW PKGDVVQQQT ITSPADSLVK
PDLSHYTPGV YVAELTVTDA NGETAKELAF FAVVNDKQPT ASARPENWVQ VRKATAEPGE
EAVFWVGNSR PGELNWVLMS VEENQTIVRN EWLKIEDRPR RVTLPVTEKQ RGGFAVHFAM
VQNGRLYEKS QTITVPFTNK ELKIETQTFR NKLKPGEREE WTLKISGLDK KPAELVATLY
DASLDIFDRL NWQTSFYQPY SPAFGSWASQ AFGVQGSQAL AYRYRPQPTA PERQYDQLNW
LGYRFSIYGS RPFGLAPLKV SNDAIRISIS RTGKTITGTA TYKDGSVAPG ISVLVKGTDK
GAVSDALGKF SINTAPTSKE VTLIFSWVGY KAQEVVLAQK SKSFQLMPDA MALNEVVVTA
YSTQSRREVT GAVAKMAAPM AAATLNQFIS NDLSLAPAQA GSGSPGQQPV VPITPRKNFS
ETAFFMPQMQ TDKDGRLVLR FTMPEALTRW RLLAFAHTKD MKTGMLEREI ITQKELMITA
NAPRFFREGD TIRVSARINN LSDKSLSVLA SLSLLDALTG EPIHQKLKLT NPQTNVLVAA
GQGQAVGWTL IVPANLDAVT CRLTAQSGSF TDGEEFTVPV LPNRMLVTDT KPFWVNGKET
KSFTLKPLAN LNPELPVQHE RLTVEVTSNP SWYALQSLPY LMEYRYECAE QLFSRLYANS
LAAHIVGSKP AFKQVIAEWQ KTRNAGPPPR NPLQSNEELK AVTLENSPWL ADARLETERQ
AKLGQLLDAN RMESEQVQAF EKLKQLQTAG GGFRWFGGME PDLSMTLHIL SGLGHLQKLG
VKFPADLQTK LTDMQSSAIQ YVDGKMKQWV TEQKKLEEQK KGKLVGEWYF SATQYLYARS
FYLDQPVDKD VLAYLKPQVA NNWLAQSLQG QALSAMALNR FGDTKTAAGI LQSLLEHSKM
SEEMGLYWPD NTSGLYWYQT PIETQAYLIE MIDEVGHTPQ GMACFDWLGQ QSKRTLGPQI
VVDEMKRWLL RQKQTQSWSS TKATTEAVYA LLLRGSDWLG TGVSTQVTLG GKSIQNRVSK
SDAITGYEKV TYAASEIKPE MGAIQITKTS DGPAWGALYW QHFEPLDQVM PGSAGLSVQK
TLYVQRDSPG GPVISTVASQ SALKPGDLVK VRLVLKTDRA MEYVHLKDGR ASGFEPVAAL
SGYKYQNGLG YYESPRDAST DFFMNYLPVG THVFEYDLRV AQSGDFSAGV ATVQCFYAPE
FSAHSAGERV RVK
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