| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5438 |
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| Symbol | |
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| ID | 8729205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6609280 |
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| End bp | 6610965 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | cell surface receptor IPT/TIG domain protein |
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| Protein accession | YP_003390204 |
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| Protein GI | 284040274 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.904053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTATGC ACGTTTCTCA ATTACGCCGT CCAACCTCCG TGTTAGTGGC GTTGGTACTT
GGCCTGTTTG TGGTGGTAAT GTCCTGTAAA AATGAGGATA CACCAGCTCC TGTTCTGAGC
ATCACCAGTT TTACGCCATC ATCTGCTCCG GCTGGCTCAA CAGTTGTTAT TACGGGTACG
GCCTTCAATG CCACACCTGC CAGCAACACG GTTACCTTTG GCGGTGTTCC GGCAACTGTA
ACGGGTGCTT CGACGACGTC GTTGACCGTT GTTGTACCAG CTAACGCAGG TACACCCATT
GCGGTTACAT CGGGTGGTGC TACAGTAACC AGCACTACAG CGTTTCAATT GGGAAATAAA
CCAGTTGTTG ATGTAACAGG TGATATCACC TCTGATCAAA AATGGACAGC CAACAACATT
TATTATCTGA AAGGCTTTGT CAATGTAAAA GCACCGGCTA CGTTAACCAT CGAACCCGGA
ACCGTTATTA AAGGGGGCGG CAAAGATGTT GACCCATCAG GGCAGCAGAA AGGCGCAACG
CTGATTATTC AGGCAGGTGC CAAGATCAAC GCAGCCGGTA CAGCCAGTGC ACCCATCGTG
TTCACATCGA ACAAAGCGGC TGGCTCTCGT AGTTATGGCG ACTGGGGCGG TGTTGTTCTG
ATCGGTAAAG CACCAACTAA CCAACCTGGC GCAACAGCCT TTGAAGGCGG AATTCCGGGA
ACACTGGGTA CCTACTCGGA TGTGAATGAC AACTCGGGTG TTATGCAGTA CGTACGGATT
GAGTTTGGCG GTATTGCCCT GCTTGCCAAC AGTGAAATTA ACGGTCTGAC CATGTACGGT
GTTGGTGCTG GTACAACACT GGATCACATT CAGGTATCGT ACAGTGGTGA TGATTCATAC
GAATGGTTTG GCGGTACGGT AAATGCAAAA TACCTCATTG CCCTACGTGG TTTTGATGAT
GATTGGGATA CCGACTGGGG CTGGTCTGGT AAAGTTCAGT ATGGCGTTGC GCTTCGCGAT
CCTGAAGTAG CTGACCAATC AGCTTCGAAC GGATTTGAAT CGGATAACTT TAACCCCGGC
TTGCCCGCCA CTGGTCCAAA CGCAGGCTTA CCGCTTACGG GTGGTGTGTT TGCCAACATG
AGTAACTTCG TCTTCAGTGG TACACCTTCG AGTGCTGCTT CGCCAAAAGG CAGTGGACCC
TTCCAGTCGG CTATGCACCT CCGTCGGAAT ACATCGCTCA GTATTTTCAA CTCGTTGATG
GTAGGCTATC CGGAAGGACT TCGTCTGGAC GCGCCAACGG GCACAACCGG TACATTGGAC
AATGCAACAA GTGGCGCTAT GCAATTGCGT GGTCTTGTAC TTGCCAACAT GAACACGCCC
GTTCGGGGAG CTGGTGCCAT TACCAATGAT CAGGCAACAG CATTCTTTGG TACAGCGGCA
TTCAAGAATC AAATCATTGC CAGTACAGAT GTGGCTAAGT TGCTGCTTAA TGCTGCAAGC
TTTAATCTGA CAGCCCCCAA CTTCCTGCCA CAGGCTGGTT CGCCCCTGCT GACAGGTGCG
ATCTGGGATG GCAAAGGAGC TGATGCCTTC TTTACGAAAG AAACGTTTAT AGGAGCGTTC
GGCACAAGCG ACTGGACCAA AGGCTGGGCC AACTTCGATC CGCAGAATGC CAACTACGAT
AAATAA
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| Protein sequence | MFMHVSQLRR PTSVLVALVL GLFVVVMSCK NEDTPAPVLS ITSFTPSSAP AGSTVVITGT
AFNATPASNT VTFGGVPATV TGASTTSLTV VVPANAGTPI AVTSGGATVT STTAFQLGNK
PVVDVTGDIT SDQKWTANNI YYLKGFVNVK APATLTIEPG TVIKGGGKDV DPSGQQKGAT
LIIQAGAKIN AAGTASAPIV FTSNKAAGSR SYGDWGGVVL IGKAPTNQPG ATAFEGGIPG
TLGTYSDVND NSGVMQYVRI EFGGIALLAN SEINGLTMYG VGAGTTLDHI QVSYSGDDSY
EWFGGTVNAK YLIALRGFDD DWDTDWGWSG KVQYGVALRD PEVADQSASN GFESDNFNPG
LPATGPNAGL PLTGGVFANM SNFVFSGTPS SAASPKGSGP FQSAMHLRRN TSLSIFNSLM
VGYPEGLRLD APTGTTGTLD NATSGAMQLR GLVLANMNTP VRGAGAITND QATAFFGTAA
FKNQIIASTD VAKLLLNAAS FNLTAPNFLP QAGSPLLTGA IWDGKGADAF FTKETFIGAF
GTSDWTKGWA NFDPQNANYD K
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