Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5387 |
Symbol | |
ID | 8729153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6547108 |
End bp | 6547818 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003390153 |
Protein GI | 284040223 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGA TTTTACTTGT TGAAGACGAC CCCAACCTGG GGCAGTTAGT ACAGGAGTAC CTGACCATGA AAGGCTACCC AACCGATCGG GCTATCGACG GGAACCAGGG GTTGCAATTA TTCATGGCGG GTAAGTACGA CCTCTGTATT TTCGATGTGA TGATGCCTAA GAAGGACGGA TTCACACTGG CGAAGGAAGT CCGGATGGAT CACCGCGACG TGCCCATCAT TTTCCTGACG GCCAAATCCA TGCAGGAAGA TACCATTCAG GGGTTTAAGG CCGGGGCCGA TGATTATATG ACCAAACCCT TTAGTATGGA GGAACTGCTG CTCCGGATTC AGGCCATTCT GCGTCGGTAC CAGCGCTCCA CCGAATCGGC CGAACCCACT ACCTACCGAA TTGGCTCGTT TTCGTTCGAT TATCCGCATC AACTTCTTTC TCGTACTGCG GACAATGCCT CATTGAATGA TCAGGAATTA GCTCCTCAGA AACTAACCAG TAAGGAATCG GAGTTATTAA AACTGCTGGC ACAAAACCTG AATCAACCGG TCAGTCGTAG TTTTGCCCTG AAAATGGTTT GGGGAGACGA TTCGTACTTC AACGCCCGAA GCATGGATGT GTACGTGACA AAACTGCGCA AGTACCTCCG GGAAGATCCC GCAGTTCAGC TTGTTAATGT GCACGGCGAA GGCTTTAAAT TAATTGTGTA G
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Protein sequence | MATILLVEDD PNLGQLVQEY LTMKGYPTDR AIDGNQGLQL FMAGKYDLCI FDVMMPKKDG FTLAKEVRMD HRDVPIIFLT AKSMQEDTIQ GFKAGADDYM TKPFSMEELL LRIQAILRRY QRSTESAEPT TYRIGSFSFD YPHQLLSRTA DNASLNDQEL APQKLTSKES ELLKLLAQNL NQPVSRSFAL KMVWGDDSYF NARSMDVYVT KLRKYLREDP AVQLVNVHGE GFKLIV
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