Gene Slin_5348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5348 
Symbol 
ID8729113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6512387 
End bp6512857 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content45% 
IMG OID 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003390116 
Protein GI284040186 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCC AAAAATTAGA TCAGATAGAT CGCAATGTAT TAGAAATTCT GCAAGCCAAC 
GCTAAAATAA CTAACGCTCA ACTCTCCAAA GAAATTGGTC TTTCACCGGC TCCAACGCTG
GAGCGCGTTA AGAAACTTGA AACGTCGGGT ATTATCCAAA GCTATCATGC GCAGTTGAAC
CGCGAGAAGA TTGGCCTTGG CGTTACTACG TTCGTTATGG TAACGCTTGT AGGACACAAG
AAAGAAACAA CGATGTCTTT TGTTGACAAG GTACACGAGA TCCCGGAGAT CATTGAATGC
CACCACATTA CCGGCTCGGG TGACTTTCTT CTCAAAGTTA TCGCCAAAGA CATTGCCTCG
TATCAGGGCC TGATGCTGGA TGTCATCAAC GAAATTGACG AAGTAGCCAG CACCCAAACG
ATGGTGATCA TGTCGACGTT TAAAGAAAGC AAAGTGCTTC CTATTCCATG A
 
Protein sequence
MSSQKLDQID RNVLEILQAN AKITNAQLSK EIGLSPAPTL ERVKKLETSG IIQSYHAQLN 
REKIGLGVTT FVMVTLVGHK KETTMSFVDK VHEIPEIIEC HHITGSGDFL LKVIAKDIAS
YQGLMLDVIN EIDEVASTQT MVIMSTFKES KVLPIP