Gene Slin_5269 details

Gene Information

• Locus tag: Slin_5269
• ID: 8729035
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: +
• Start bp: 6424581
• End bp: 6429482
• Gene Length: 4902 bp
• Protein Length: 1633 aa
• Translation table: 11
• GC content: 56%
• Product: Fibronectin type III domain protein
• Protein accession: YP_003390039
• Protein GI: 284040109

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.803528
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 37
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAACACG TATTCTTGTT ATTGTTCCTG TTTGCCAGCA TCACTTCCCT ACAAGCTCAG 
GTGTCGGAAA CAACAGGAAT CCGACTTTAC CGGGTTAACG ATCATCTTGT CAAAACAGAA 
GCAGACGGCT CTAACCCGAT CAGCTATCCG TTTGCCAATG TGCAGGTACG CGCAGCCAAT 
GACCTGATAG AAGTGGGCAT TACAAGTGCC GCTACTCTCT ATTACACTCC CTCACTTTTT 
CTTAATGACC AGGGGGTTCC GTACGGCAGC ACGGTCAATT CAGCCGTTAG TACTTTCCTG 
CAAACCATTC CCGGCACTTC ATCCACAGGC AGTAGTGGAA CAGCCGTGAC AACCGATGCC 
AGCCTGCTAA CATCGGGCAC GCTGGACGAT GCCCGCCTGA GTGCCAACGT GGTCAAGACA 
ACCGGTTCTT ACTCGAACCC CACCTGGCTA AACGCCCTCG ACCCTACCTG CATCACCCAA 
ACCAGTCTCC ACCGGTTCGT CTCTGACACG GAGAAAGAGG CCTGGAACAA CAAGCCTGAC 
CTTGCCCAGG TGCGCTCAGT CGTCAAGGAC AGCCTGCGTA CCTACACCTT CGTCAATGCG 
GGCGTTGTCA CCAACGGTTC TTCCACCACC GTCACCATCC CCACCGGGGG CGGGGGTGCT 
TCCATGCCGG TTGACAGTGT CCTGAGTAGC ACATCGCCCA ACGCCATTGC TAACTCGGCC 
GTGACCAGGG CCATCAACCA GGCCAATGCC AGCATTGCTA CTAACACCAC AGCGATTAGT 
CAGGCCAACG CCAGCATTGC TACTAATACC ACGGCCATTA ATCAGGCCAA CGCCAACATT 
GCCGCCAATA CCACGGCCAT CACCGCCAAT GCGGCCAGCA TAACCGCTTT GCAAACCCAG 
CTCACGTCCG TCACTACCCA GTCAGGGCCG GTGGACGATG CCCGCCTGAG TGCCAACGTG 
GTTAAAACGA CCGGCTCCTA TTCAAACCCC ACCTGGCTAA ACGCCCTTGA CCCTACCCGC 
ATCACCCAAA CCAGTCTCCA CCGGTTCGTC TCTGACAGTG AGAAAGAGGC CTGGAACAAC 
AAGCCCGACC TTACCCAGGT GCGCTCAGTC GTCAAGGACA GCCTGCGCAC CTACACCTTC 
GTCAATGCGG GCGTTGTCAC CAACGGCTCA TCCACCACCG TCACCATCCC CACCGGGGGC 
GGGGGCGCTT CCATGCCGGT CGATAGTGTC CTGAGTAGCA CATCGCCCAA CGCCATTGCT 
AACTCGGCCG TGACCAGGGC CATCAACCAG GCCAATGCCA GCATTGCCAC TAACACCACG 
GCGATTAGTC AGGCCAACGC CAACATTGCC GCCAATACCA CGGCCATTGC TACTAACACA 
GCGGCCATCG CCACTAATGC GGCCAGTATA ACCGCTCTGC AGACCCAGGT GACGGCCGCT 
ACGGCTACGC TATCAGGTCC GGTGGATGAT ACCCGGCTGA GCGCCAATGT GGTTAAAACA 
ACCGGCTCGT ATTCAAATCC AGGCTGGATA AGTGCTTTTG ACCCTACCCG TATTACCCAG 
ACCAGTTTAT ACAGGTTTGT CAGTGATAGC GAGAAGGAGA CCTGGAATAA TAAGACTGAT 
CTCTCGCAGG TTCGGTTAGC CATCAAAGAC AGTGTTCGCG CCATTACCTT CGTTAATGCC 
GTGGTTACCA GCAATGGAAA TTCACTCACC GTAACCATCC CGAACGGGGG TACCAATGGT 
AGTTCGGTAA CGGTCGATAA TGCGCTGAGT CCCACATCGA CCAACCCGCT CACCAATGCA 
GCCATAAACG CGGCCTTCAA TCAGGTTAAC AATAACATTG CGGCAAACAC GGCGGGCATC 
GCCACCAACA CGACCGCTAT CAATCAGGTA AATGCCACTA TCTCCAATTT GTCGAATACC 
GTTGCGGCAA ACACAGCCAC TGTAACCAGC AGCGCAGCCA GTGTAACGGC CTTACAGACA 
CAATTGGCCA TAACCATGGC TCAGGTAGCC AGCCTGTCGG CATTGGTTGG TCAATTGCAG 
GAGCAGATCG CTATTAGTTC GGGCACATAC ACCATATCGA CACCAACACT TACGGCATCA 
ATTTCCAGCA ATACATCTAT ATTACTTTCC TGGGGAGCAT CGACCAACGC AACCTCGTAT 
ACGCTGGAGT CAGCGACAAA TTCTGGTTTT ACGGAAAACC TGACCATGCT GTCTGTACTC 
TCAGGTACCA GTTATACAGC AACGGGACTG ACAGCTGGCA TAACCTATTT TTTCCGGATC 
AGGGCATCGG GCGGATCAAA TACGTCCCCA TCCGGCTATG GCACTGTGTC GGCTACTATT 
TCAACGGTTC AGCCAACGCT CGCTGCGCCC ACAAACGTAG TGGCGTCGGT AGTCAGTTCA 
TCAGCCATTA CCGTTTCGTG GAGCGCGTCG CCCAACGCCA CCAGTTACTC GGTTCGTTAC 
GCCACCAATA GCAGCATGAA CTCGGCAACC AGCATTACTA CCTCCACCAA CAGCATTGCG 
CTTACAGGCT TGACACCCGG CACGTCTTAC TTTATTGACG TTTCGGCCAG TGCTGCCGGG 
TTCACCCAGT CGGCAACCAG CGCCATCGTT ACAGCAACGA CCAGTGCGCC GGTACCAACG 
CTGGCAACAC CGACAAACGT AGTGGCGTCG GTCATGAGCG AATCGGCCAT TACCGTTTCC 
TGGACGGGCA CCCTCAATGC TACCAGTTAT TCGGTCCGTT ATGCGCCTAC CAGTGATATG 
ACCTCGGCAA CAACGGTCAC GACCGCTACC AACAGCGTTA CGCTGACGGG CCTGGCGCCG 
GTGACAACCT ACTACATTGA TGTATCGGCG ATGGCATCGG GCTTCACTCC GTCAGCAGCC 
AGCCCGGCTG TTGCGGCAAC GACCAGTGCG CCTACGCCAA CCCTCGCTGC GCCCACAAAC 
GTAGCGGCAT CGACGGCTAG CCCATCGACC ATTAACGTTT CGTGGAGCGC GTCGCCCAAC 
GCCACCAGTT ACTCGGTTCG CTACGCGACC AACAGCAACA TGACCTCAGC CACGACGGTA 
ACCAGCTCCA CCAATAGCAT TACGCTTACA GGATTGGTAC CGGCAACCAC TTATTTTATT 
AACGTTTCGG CCAGTGCGCC GGGCTATATT TCATCGGATG CCAGTGCTGT CGTTACGGTA 
ACGACCGGTC AGACGCCGGT AACGCTGGCA GCGCCCACAA ACGTAGTAGC GTCGCCACAA 
AGTACCTCAG CCATCGCCGT TTCCTGGACC GCGTCGCCTA ATGCCACCAG TTACTCGGTT 
CGGTATGCTA CCAACAGCAG CATGACTTCG GCCACCACAG TCACAACGAC CACCACCAGC 
ACGATCCTTA CGGGACTTCT ACCAGCCACC TTCTACTTTA TTGATGTATC GGCGATGGCT 
TCGGGCTTTA CGTCATCGGT ACCTGCCACG ACCACGGCCG GAACTCCCGA TGCACCGGTA 
ACGCTGGCAG CACCCACGAA CGTAGTGGCG TCGCCACAAA GTACCTCAGC CATCGCCGTT 
TCCTGGACCG GATCGGCCAG CGCCACCGGT TATTCGGTCC GCTACGCCAC CAACAGCAGC 
ATGACCTCGG CCACGACGGT CACGACCACC GCGACCAGCA CGACCCTTAC CGGGCTAAAG 
TCTTCCACAT CTTACTTTAT TGATGTATCG GCAACGGCTC CGGGCTTTAC GGCTTCGGTA 
CCCACTTCGG CCACGGCCCG CACGAATGAT GCGCCGGTAA CACTGCCGAC ACCTACGAAC 
ATAGTGGCAT CGGCACAAAG TACCTCGACC ATTGCCGTTT CGTGGACCGG GTCGACCAGC 
GCCACCAGTT ATTCGGTCCG CTACGCCACC AGCAGCAGTA TGACTTCGGC CACGACGATC 
ACAACGACAA CGACCAGCAT CACCCTCACA GACCTGGCCT CGGGAACACT CTATTTTGTT 
GATATATCGG CGAGTGCCCC CGGCTTCGTC ACATCCGCTA CCAGTGCAAC GGCTTCGGCA 
AGAACGATTG GTAATCTGGC AATACCTGCC AACGTGGTCG CAACGGCGCT GGGTGGATCG 
GCGATTGGGG TTTCGTGGAC TGCGTCGCCC AACGCCACCA GTTATTCAAT TCGCTATGCG 
CTTACCAGTG ATATGACTTC GGCAACAACG GTCACGACCG CTGCTACGAG TACGACGATT 
ACGGGATTAA CTACCCTGAC GACCTACTTT GTTGATGTAT CGGCGAGTGC TTCGGGCTAC 
ATCACATCGG CCACCAGTCC TGTTTCTTCG GCAACGACGA CGGCCGCTTT TGTCGCCGAA 
CGGACATTTA GGCTGGCATT CCAGGGCGCC ACTTCCGGCG TGGCAACGAC GGGCTGGAAC 
CAGATCAAGC CAACGGCGGC TCAGTTAAGT GCCCCGAACT CGTATACGTC CGGCATGTTG 
CTGACAGAGT CGGGAGCTAG CTCAACTATC TTTGTAACCT TGGAGAGCCC TTATACGCAG 
GCAACAGCCA GTAGCTTTAC CGCCACAGCG GGCAGCATTT ACCCACAAAC CGTCATGCAA 
TCGGCCTGGC AGGTAACATC GGCAAACCTG GCCGGTGGCC GTTACAGTAT TAACGGATTG 
ACGCCGGGCA AATACTATCA GTTGTATTTC TTGAGTGCAA CCACTATAGC CAGTAACGCC 
ACGGTGAGTT ACACCATAAA CGGGGTAGTA AAAACGATCA ATGCCGGTTT TAATTCCGGG 
GTTGGCGGGG GAGCTGAATT TGCACCAAAC AAAGCCCTGG TCACTTATTT TAACGTTCAG 
CCTGACGCAA ATGGCCGGAT TACCGTTTCC AACAAGTATG TTTCGGGAAC CGTATCGCCA 
TTTACCACTT GCGTCATTCG TGAATCCAGC GTACCACTTT AA 

 

Protein sequence

MKHVFLLLFL FASITSLQAQ VSETTGIRLY RVNDHLVKTE ADGSNPISYP FANVQVRAAN 
DLIEVGITSA ATLYYTPSLF LNDQGVPYGS TVNSAVSTFL QTIPGTSSTG SSGTAVTTDA 
SLLTSGTLDD ARLSANVVKT TGSYSNPTWL NALDPTCITQ TSLHRFVSDT EKEAWNNKPD 
LAQVRSVVKD SLRTYTFVNA GVVTNGSSTT VTIPTGGGGA SMPVDSVLSS TSPNAIANSA 
VTRAINQANA SIATNTTAIS QANASIATNT TAINQANANI AANTTAITAN AASITALQTQ 
LTSVTTQSGP VDDARLSANV VKTTGSYSNP TWLNALDPTR ITQTSLHRFV SDSEKEAWNN 
KPDLTQVRSV VKDSLRTYTF VNAGVVTNGS STTVTIPTGG GGASMPVDSV LSSTSPNAIA 
NSAVTRAINQ ANASIATNTT AISQANANIA ANTTAIATNT AAIATNAASI TALQTQVTAA 
TATLSGPVDD TRLSANVVKT TGSYSNPGWI SAFDPTRITQ TSLYRFVSDS EKETWNNKTD 
LSQVRLAIKD SVRAITFVNA VVTSNGNSLT VTIPNGGTNG SSVTVDNALS PTSTNPLTNA 
AINAAFNQVN NNIAANTAGI ATNTTAINQV NATISNLSNT VAANTATVTS SAASVTALQT 
QLAITMAQVA SLSALVGQLQ EQIAISSGTY TISTPTLTAS ISSNTSILLS WGASTNATSY 
TLESATNSGF TENLTMLSVL SGTSYTATGL TAGITYFFRI RASGGSNTSP SGYGTVSATI 
STVQPTLAAP TNVVASVVSS SAITVSWSAS PNATSYSVRY ATNSSMNSAT SITTSTNSIA 
LTGLTPGTSY FIDVSASAAG FTQSATSAIV TATTSAPVPT LATPTNVVAS VMSESAITVS 
WTGTLNATSY SVRYAPTSDM TSATTVTTAT NSVTLTGLAP VTTYYIDVSA MASGFTPSAA 
SPAVAATTSA PTPTLAAPTN VAASTASPST INVSWSASPN ATSYSVRYAT NSNMTSATTV 
TSSTNSITLT GLVPATTYFI NVSASAPGYI SSDASAVVTV TTGQTPVTLA APTNVVASPQ 
STSAIAVSWT ASPNATSYSV RYATNSSMTS ATTVTTTTTS TILTGLLPAT FYFIDVSAMA 
SGFTSSVPAT TTAGTPDAPV TLAAPTNVVA SPQSTSAIAV SWTGSASATG YSVRYATNSS 
MTSATTVTTT ATSTTLTGLK SSTSYFIDVS ATAPGFTASV PTSATARTND APVTLPTPTN 
IVASAQSTST IAVSWTGSTS ATSYSVRYAT SSSMTSATTI TTTTTSITLT DLASGTLYFV 
DISASAPGFV TSATSATASA RTIGNLAIPA NVVATALGGS AIGVSWTASP NATSYSIRYA 
LTSDMTSATT VTTAATSTTI TGLTTLTTYF VDVSASASGY ITSATSPVSS ATTTAAFVAE 
RTFRLAFQGA TSGVATTGWN QIKPTAAQLS APNSYTSGML LTESGASSTI FVTLESPYTQ 
ATASSFTATA GSIYPQTVMQ SAWQVTSANL AGGRYSINGL TPGKYYQLYF LSATTIASNA 
TVSYTINGVV KTINAGFNSG VGGGAEFAPN KALVTYFNVQ PDANGRITVS NKYVSGTVSP 
FTTCVIRESS VPL