Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5267 |
Symbol | |
ID | 8729033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6421530 |
End bp | 6422810 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | PKD domain containing protein |
Protein accession | YP_003390037 |
Protein GI | 284040107 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.477377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGAGA GAAAGGGGGA GAGGTTACTA AATCAGGTTC GTCTTCTTTG CATTCTCGCG TATCTGGTAA CAGGCTTTTA CCCCGAAGCG GCTTATGCTA AATCAAACCA GTTACCAGCG ACCGGGTATC CGGCGGAGGC AACAGCTACC GGTACGAAAA GCGTCACGGT AGTTGACAGG AAAACACCGG TCATTAAAAC CAATGGCGAC AAAACGTTTA CGTACAAGGC TGGTAAGTGC GGAGTTGTCT TCAAAGCATC GGCATTAGCA ATCGGAAACG GTTCTGTAAG AAAACCGAAA GCGGTACGCA GCGATGGAAA ACCATTAAGT GCCGAGTATT TGGCCGGTGT CACAACCATT GTCTGGAGCC TTATGGATGG CAATACTGTA TCCCCCGTTA CACAAACCAT AACCGTACTC GATAGCGAAG CACCGGTTAT CAGTACCAAT GGTGATAAAG TGCTTCCAAA CGACGCTGGT AAGCCGGGAG CCGTTGTCGA CCTGTTCGCG TTGGCCACGG ATAACTGCTC GGTTGGTCAG CCCATTGGCG TACGTAGTGA TGGTAAACCC TTAGCGGCCG AGTATCCGGT GGGGACAACA ACCGTTACCT GGCATGTCAG CGATATTAAT GGAAATGCAG CAGTCCCTGT TACACAAACC GTTACTGTAA CCAACGCGAC ACCGGTTGTA AGCCTGATAA AAGCCCCCGG CGATCCGGTA AAGATCGGCA ATGAAGCGAA CCTTACCGTT AATTTTACCG ATACCAATAG CGGTCAGGCT GTGTGGTACT GGGGAGACGA AACATCGTCG GTCGGGGTCA TTGAGGGGTT CACCGTACGG GGTACTCATC GGTATACCAA AGCCGGTGTT TACTCAGTCA CCTTTGTTCT GACGGATCTA TGCGGTAAAT CAGCCCGTCA GGATCATCAT TATGTTGTCG TTTATGATGC CAGTACCGAC TCCCGCTCCC TGACGTCGCT CGCTGGTGCA GAAGCGGCTG TAAAGGCGCC GGTGTCTACC GACGCCTTCT TACTGCGCAA CTACCCTAAC CCGTTCGAGA CAAAGACGGC CATTGAGTTT GTACTGCCAC AAGGCGGAGA GTACACACTG AACATTCTGG ACATGAAAGG TAGTGTGTTG CGTTCGCTCC AGACCGGTAA AGCTCAGGCT GGTGCATTAA ACCGCGTAAC GTGGGAGGTT AAAGAGTTTC CCAATGGCCT GTATATTGGT CAGTTAACCA CCTCTCAAGG TGTCAAGTCT ATTGAACTAC TGGTAAAGTA A
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Protein sequence | MVERKGERLL NQVRLLCILA YLVTGFYPEA AYAKSNQLPA TGYPAEATAT GTKSVTVVDR KTPVIKTNGD KTFTYKAGKC GVVFKASALA IGNGSVRKPK AVRSDGKPLS AEYLAGVTTI VWSLMDGNTV SPVTQTITVL DSEAPVISTN GDKVLPNDAG KPGAVVDLFA LATDNCSVGQ PIGVRSDGKP LAAEYPVGTT TVTWHVSDIN GNAAVPVTQT VTVTNATPVV SLIKAPGDPV KIGNEANLTV NFTDTNSGQA VWYWGDETSS VGVIEGFTVR GTHRYTKAGV YSVTFVLTDL CGKSARQDHH YVVVYDASTD SRSLTSLAGA EAAVKAPVST DAFLLRNYPN PFETKTAIEF VLPQGGEYTL NILDMKGSVL RSLQTGKAQA GALNRVTWEV KEFPNGLYIG QLTTSQGVKS IELLVK
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