Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5180 |
Symbol | |
ID | 8728946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6324867 |
End bp | 6325835 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | glycosyl transferase family 2 |
Protein accession | YP_003389951 |
Protein GI | 284040021 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.48188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAAG TAAGCGTTCT GATTATTACT TATAATCAGC AGAATTTCAT CCGTCAGGCC ATCGATAGCG CGCTGGCTCA ACAAACTACG TTCCCAATTG AAATCCTGGT TGGCGATGAT TTCTCGAAGG ATGGAACAAG AGAAATTATT CAGGAATATG AACGCCAGCA TCCTGGTCTG GTACGCGGTA TTTTACACCC GCGTAACATG GGTAAGAACG GGGGGATAAA CTTTCTGGAA ACGCTGAAGC AGGCCAAAGG CGAATATTAT GCCCTGATGG ACGGCGACGA TTATTTTACC GACCCGCTTA AAATTCAGAA GCAGGCCGAT TTGCTCGATG CCCATCCGGA TTATTCGATG GTCTTCCACA ATGCGTTGAT TACCTACGAA GATGGCAGCC CGTCGCATGT GCTCAACGGA CCCGATACAA AGCCGTTTTT TACTATTGAG GATCTGATTG GAGAGGATGA AATCTGGTTC ATGGCCACGT CGAGTACCAT GTATCGAAAC TCGATCAAAG AGTATCCGGC CTGGTTTAGC GAATCGGTTA GCGGTGACAT CCCCCGCCTG ATCCTAAAGG CTAAGATGGG TAAAATAGGG TATATCCCCG ATCTTATGTC GGTGTATCGG AAAAACAGCA ATGGCACCAG CTATTCTGAT AAGTATGACG ATGCCGTTTT CCTGCAAAAC CGGATTGATA TGTACTCGAA TATCAACCGC GAGCTGGACT ACCGATACGA CGGCCTGTTG AAGAAAAATA TAGCCCGGTA TTATCGAATG ATGCTGAGAA GCAAGCAGTT TCGTGATTCT TATTTCGCAA AAGTACGGCT CGCTCTTCGC TATTATACCC TGGCAAAACC AAACTGGGTT GACTTGAAAT CAGTCATTTA TGACTATTTA ACCCCACCTG TTTTACAGCG TGCTTACGGA ACGGTAGCCA TTGGCCTGCA CCGTATTCTA AATAATTGA
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Protein sequence | MPKVSVLIIT YNQQNFIRQA IDSALAQQTT FPIEILVGDD FSKDGTREII QEYERQHPGL VRGILHPRNM GKNGGINFLE TLKQAKGEYY ALMDGDDYFT DPLKIQKQAD LLDAHPDYSM VFHNALITYE DGSPSHVLNG PDTKPFFTIE DLIGEDEIWF MATSSTMYRN SIKEYPAWFS ESVSGDIPRL ILKAKMGKIG YIPDLMSVYR KNSNGTSYSD KYDDAVFLQN RIDMYSNINR ELDYRYDGLL KKNIARYYRM MLRSKQFRDS YFAKVRLALR YYTLAKPNWV DLKSVIYDYL TPPVLQRAYG TVAIGLHRIL NN
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