Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5173 |
Symbol | |
ID | 8728939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6318737 |
End bp | 6319612 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | transcriptional regulator, MerR family |
Protein accession | YP_003389944 |
Protein GI | 284040014 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTACGT ACTCAATCAG AGATTTAGAG CAGCTGTCTG GCATTAAAGC CCATACCCTA CGCATCTGGG AACAACGCTA CGCGATTTTG ACGCCAGATC GAAGCGATAC CAACATTCGT TCTTACGGTG ATGAGGACCT CAAGCGTGTT CTGAATATTT CGCTGTTAAA AGATCACGGA TATAAAATTT CGGAGATTGC GAAGCTGTCG TCAGAAGAAC TGAGCAACGA AGTCGTGAAA ATTTCCGAAC GGCAGCTCAA CTACCCCGAC CAGATTCATG CCCTGACGAT CTCGATGCTT GATCTGAGCG AAGATCGGTT CGAAAAAATC ATCAATACCA ACATCAGTCA GTTCGGTTTC GAGAATACGA TGATCAACAT CGTGTACCCA TTTTTAAGCC GTATTGGTAC GCTTTGGCTC ACGGGTTCTG TAGGCCCGGC GCAGGAGCAC TTTATTACGA ACCTGATCCG ACAAAAACTG ATTGTTGCCA TTGACGGATT ATCCGCCACT ACACCAAGTA ACGGCAAAAA GTATATGCTC TTCCTGCCGG AAGGCGAATT TCACGAGATC AGCCTTTTGT TCGCGCATTA CATCATTCGC TGCCGCGCCA ACAAGGTGAT TTATCTGGGC CAGAGCCTCC CCTTCAATGA ACTGGTATTT GCCCACTCGC TGTATAAACC AGATTGCATT TTCTCGGTCA TTACATCGGT GCCGTCCAAC CATGAAGTGC AGCCCTATGT CGATCGACTG GCAAAAGCGT TTCCTGATTC ACAGATTCTG TTGACGGGTT ATCAGGTAGT GGGGCAGGAC ATCGAGACAC CAGAGAATAC CCGCATCGTC AACCAAATCA ATGATTTAAT GCGCCTTGCC AGCTAG
|
Protein sequence | MSTYSIRDLE QLSGIKAHTL RIWEQRYAIL TPDRSDTNIR SYGDEDLKRV LNISLLKDHG YKISEIAKLS SEELSNEVVK ISERQLNYPD QIHALTISML DLSEDRFEKI INTNISQFGF ENTMINIVYP FLSRIGTLWL TGSVGPAQEH FITNLIRQKL IVAIDGLSAT TPSNGKKYML FLPEGEFHEI SLLFAHYIIR CRANKVIYLG QSLPFNELVF AHSLYKPDCI FSVITSVPSN HEVQPYVDRL AKAFPDSQIL LTGYQVVGQD IETPENTRIV NQINDLMRLA S
|
| |