Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5150 |
Symbol | |
ID | 8728916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6288786 |
End bp | 6289547 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | ribonuclease III |
Protein accession | YP_003389921 |
Protein GI | 284039991 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0990083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.260918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAATCG CTCTGCCCCG TAGTTTATTC AATCCTCTCG ACTGGTTCAA GCGTGGCAGC GCTGATCCGC GCAAAAATCT GCGCCGGTCC ATTGCGCATA TCATTGGCGC ACGCCCATCA AACCTTGGCT TGTATCAGTT GGCGCTCCGT CATACGTCGG CGTCGAAAGC GACGGCTATT GAGGGATTTC GGGAATCGAA CGAACGGCTG GAGTATCTGG GCGATGCTGT GCTGGGTATG GTTATTGCCG AATTTCTGTT CAAGAAGTAT CCCTACAAAG ATGAAGGCTT CCTGACGGAG ATCCGTTCCC GAATTGTTAA CCGGGAAACA CTGAACGGGA TTGCCCGCAA AATTGGCCTC GATCAGCTCA TAGAATACGA TGGAAGTCGG ACACGTAGCC TGCCCGCTCG TACATCCATG TATGGCGATG CGCTCGAAGC GCTGGTTGGC GCCGTGTATC TGGATAAAGG GTTTCGGTTT TCGCGCCGGT TTATTCTCAA GGATTTGCTG GCCCATTACG ATATTGAGTC CGTCGTCCAG AACAATGGCA ACTACAAGAG CCGTCTGATT GAGTGGGCGC AACGCGAAGG CAAAGAAATC CGCTTCGAAA TCGTTTCAGA AAAAGGGAAC AGCCATTTCC GCGAGTTCAT TTCGCAGGTT GTTATCGACG ATGAGCCATT TGCCACAGGA AGCGGATACA GCAAGAAAAA AGCCGAACAG GCCGCAGCCG AAAAGGCTTT CGAAATGCTG ACAGCTAAAT AG
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Protein sequence | MQIALPRSLF NPLDWFKRGS ADPRKNLRRS IAHIIGARPS NLGLYQLALR HTSASKATAI EGFRESNERL EYLGDAVLGM VIAEFLFKKY PYKDEGFLTE IRSRIVNRET LNGIARKIGL DQLIEYDGSR TRSLPARTSM YGDALEALVG AVYLDKGFRF SRRFILKDLL AHYDIESVVQ NNGNYKSRLI EWAQREGKEI RFEIVSEKGN SHFREFISQV VIDDEPFATG SGYSKKKAEQ AAAEKAFEML TAK
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