Gene Slin_5145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5145 
Symbol 
ID8728911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6284775 
End bp6285374 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content51% 
IMG OID 
ProductMORN variant repeat protein 
Protein accessionYP_003389916 
Protein GI284039986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.266583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAGC GGGCACCGTT ACGCAGTAAG TTTGGTCAGG TAGTCGCGCT GCTGCTTATA 
CTGACCGGTT GTCGGCAAAG TGCACCGGCT ACCACCATTC CGCACGTATA TGCTTCAGCA
GACCTGCCCG GGTGGCAAAA GCGGGCAGGT AAACTATGGC GGCAAGACAC GCTCTTTAGT
GGTTGGTCTT ATCAGCTTGG GGCTACCGGC GACACCACTT TTTTAGGTTC GTACTATCTC
GGAAAGGCTG AGGGGTCCCA CCGGCAATGG TATTCAAATC ATCAGCTAAA GGAAATTCGC
CACTATAGTA ATGGCTGGCA GGAAGGCGAG CAACGCGGCT GGTACGAGTC GGGCAAACCA
ACCTTTATTT ATCAGTTTAA AAGCGATGTG TACGAAGGCA GTCGAAAAGA ATGGTACCCG
AACGGACAGC CAGCGCAGGA TGGCCATTAC CACGAAGGAC ATGAACATGG CTCACAACGA
ATGTGGTACG CCGATGGAAG TTTGAAAGTA AATTATGTAG CCCGAAACGG CCGGAATTAT
GGATTTACAG GGGTCAAAAA CTGCGTCAAT GTCTGGGATT CGATTCCTGT TTCGCACTAG
 
Protein sequence
MVKRAPLRSK FGQVVALLLI LTGCRQSAPA TTIPHVYASA DLPGWQKRAG KLWRQDTLFS 
GWSYQLGATG DTTFLGSYYL GKAEGSHRQW YSNHQLKEIR HYSNGWQEGE QRGWYESGKP
TFIYQFKSDV YEGSRKEWYP NGQPAQDGHY HEGHEHGSQR MWYADGSLKV NYVARNGRNY
GFTGVKNCVN VWDSIPVSH