Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5135 |
Symbol | |
ID | 8728901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6276680 |
End bp | 6277825 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_003389906 |
Protein GI | 284039976 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTTA CGCTAAAGGA AGTGACGCAA CAACCGAATG CCCCCACCCA ACAACAGTGG CTTACCCCCC GCCGACTACT TCTTTGGGAA AAATGGGGAA TATGGATTGT TATCGCCATT GGCATCATAA TCCTTTTATA CACTGATTTT GGGGATTTTG TACGCGGATT CAAGGATGGC TTTGAGGATG CCGGTCGGAA AGATGCAGCT ACCCTGATCG GGGCGATTAT TGGCGGGCTA TTTGGTCTTT TAGTGATTAT TGGGTTGCTG TCGGGTATTG CCTATGTCTA CTATGTGCTG TTTCACCGGC ACGTATTCAA GAAGAATCAG ACAGCTTATA CCATCCTGTA CATTGTTTGT TTGCTGCTGC TCTGGAATTT TATTAGTGAT GGATTGACCA GCTTGTTTGC GAATTTCGAT CTGGCTAAGA AGCGGGAAGC AAAAGCCTAC AATGAGATGT TTGCGTCGAC CCTAACATCC TTGCTGCTCA TTTACATGGT CGTTTACGGG TTTATTGTCG ACTTTCGGAA AAGCCGGAAG CTACAGGTCG CCCTTATTCA GCAGCGCACT CAGGCCGAAC TCGATGCGCT GAAAGCCCAG GTAAACCCGC ATTTTCTGTT CAATTCGCTC AATAACATTT ACGGCACGGC GATTCTGGAA GATAGCCCCC GAACTGCCGA GAGCATTCAG CAGCTATCGG GTATTGTGCG CTACGTGATG GAAGAGTCGC GGCTGCAAAC GACCGATATT CAGCGGGAAC TCCGTTTTCT TGATGATTTC GTCGAGTTAC AGCGGCTCCG GCTCCCGAAT AAGGATAACA TCGACATCCG GGTAAACATC GACTGGGACG AGAAACCCGC CCGAATTGTG CCCCTGCTGC TAAATCCACT CATCGAAAAT GCGTTTAAAT ACGGCATCAG TATGCAGTAT CCCTGTTTTG TCCACGTCCG ATTGCGCGTG CAGGACGGAA CCTTACACCT CACCACCGAA AATAGCGTTC TGACCCGCAC GGATCTCGAA AAAGGAACGG GGTTGGGGCT GGCTAATGTT CGTCAGCGGC TTATGTTGGC CTATCCGGAT CGGCACACGC TAACGGTTTC TGACAATAAC GATACTTTTT TGGTAGAATT GACTATACAC CTTTAA
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Protein sequence | MELTLKEVTQ QPNAPTQQQW LTPRRLLLWE KWGIWIVIAI GIIILLYTDF GDFVRGFKDG FEDAGRKDAA TLIGAIIGGL FGLLVIIGLL SGIAYVYYVL FHRHVFKKNQ TAYTILYIVC LLLLWNFISD GLTSLFANFD LAKKREAKAY NEMFASTLTS LLLIYMVVYG FIVDFRKSRK LQVALIQQRT QAELDALKAQ VNPHFLFNSL NNIYGTAILE DSPRTAESIQ QLSGIVRYVM EESRLQTTDI QRELRFLDDF VELQRLRLPN KDNIDIRVNI DWDEKPARIV PLLLNPLIEN AFKYGISMQY PCFVHVRLRV QDGTLHLTTE NSVLTRTDLE KGTGLGLANV RQRLMLAYPD RHTLTVSDNN DTFLVELTIH L
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