Gene Slin_5113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5113 
Symbol 
ID8728879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6252912 
End bp6253673 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF1264 
Protein accessionYP_003389887 
Protein GI284039957 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.745234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCAT TCAGCTCGCA GTCGATCTTT ATAGCCCTTA CACTACTGGG TATGCTGAGC 
TGTGGCGGCA AAAATACCTC TTCCAATGTG CAGTCGCCGG GAAGCGAAAA GACGGCCAAA
ACAAAAACGC TTGAAGCAGG CGCGGATGTT CTTCAAAACA AGGCACCTTT AAACAAGCTG
AACATGTATT TGGATGGCTT CCACTTTTAC AACGGGCACA TGGATGGTCA GATGGAAGCT
CACCATTACT GTTCCGACAT CAACGAAGAC CTCACCCAGT GCATCATTTA CGACGGTAAC
GGAGCGAATG CCAAAATTAT GGGCATCGAG TATATTGTCT CCGAAAAGCT ATTTAAAACG
CTGCCTGCCG AAGAGAAAAA ACTATGGCAT AGCCACGTTC ATGAGGTTAA ATCGGGTCAG
TTGATTGCTC CCGGTATTCC GCAGGTGGCC GAACATGAAC TAATGGAAAA ACTGGTGTCT
ACCTATGGCA AGACATTCCA TACCTGGCAT ACCGACCGCG AGCTAACCCT GCCCGTTGGC
CACCCGATGA TTATGATGGG ATTCACTAAA GACGGCCAGA TCGACACCAG CATGGTAGCC
GATCGGGATA AACGCTTTGA CGTATCGACC GCCAAAAACA GGGAAAACCG GGCTGATATT
CCGGCACCTA CTATTCTGCC GGGGGCAAAC GCCTGGCAGC AGGGAGAGGT CCGTCAGTTG
CAGGTGGTGA ATGAAGCCGG ACCCGCACAC ACCCATAAGT AA
 
Protein sequence
MTSFSSQSIF IALTLLGMLS CGGKNTSSNV QSPGSEKTAK TKTLEAGADV LQNKAPLNKL 
NMYLDGFHFY NGHMDGQMEA HHYCSDINED LTQCIIYDGN GANAKIMGIE YIVSEKLFKT
LPAEEKKLWH SHVHEVKSGQ LIAPGIPQVA EHELMEKLVS TYGKTFHTWH TDRELTLPVG
HPMIMMGFTK DGQIDTSMVA DRDKRFDVST AKNRENRADI PAPTILPGAN AWQQGEVRQL
QVVNEAGPAH THK