Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5113 |
Symbol | |
ID | 8728879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6252912 |
End bp | 6253673 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | protein of unknown function DUF1264 |
Protein accession | YP_003389887 |
Protein GI | 284039957 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.745234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCAT TCAGCTCGCA GTCGATCTTT ATAGCCCTTA CACTACTGGG TATGCTGAGC TGTGGCGGCA AAAATACCTC TTCCAATGTG CAGTCGCCGG GAAGCGAAAA GACGGCCAAA ACAAAAACGC TTGAAGCAGG CGCGGATGTT CTTCAAAACA AGGCACCTTT AAACAAGCTG AACATGTATT TGGATGGCTT CCACTTTTAC AACGGGCACA TGGATGGTCA GATGGAAGCT CACCATTACT GTTCCGACAT CAACGAAGAC CTCACCCAGT GCATCATTTA CGACGGTAAC GGAGCGAATG CCAAAATTAT GGGCATCGAG TATATTGTCT CCGAAAAGCT ATTTAAAACG CTGCCTGCCG AAGAGAAAAA ACTATGGCAT AGCCACGTTC ATGAGGTTAA ATCGGGTCAG TTGATTGCTC CCGGTATTCC GCAGGTGGCC GAACATGAAC TAATGGAAAA ACTGGTGTCT ACCTATGGCA AGACATTCCA TACCTGGCAT ACCGACCGCG AGCTAACCCT GCCCGTTGGC CACCCGATGA TTATGATGGG ATTCACTAAA GACGGCCAGA TCGACACCAG CATGGTAGCC GATCGGGATA AACGCTTTGA CGTATCGACC GCCAAAAACA GGGAAAACCG GGCTGATATT CCGGCACCTA CTATTCTGCC GGGGGCAAAC GCCTGGCAGC AGGGAGAGGT CCGTCAGTTG CAGGTGGTGA ATGAAGCCGG ACCCGCACAC ACCCATAAGT AA
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Protein sequence | MTSFSSQSIF IALTLLGMLS CGGKNTSSNV QSPGSEKTAK TKTLEAGADV LQNKAPLNKL NMYLDGFHFY NGHMDGQMEA HHYCSDINED LTQCIIYDGN GANAKIMGIE YIVSEKLFKT LPAEEKKLWH SHVHEVKSGQ LIAPGIPQVA EHELMEKLVS TYGKTFHTWH TDRELTLPVG HPMIMMGFTK DGQIDTSMVA DRDKRFDVST AKNRENRADI PAPTILPGAN AWQQGEVRQL QVVNEAGPAH THK
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