| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5058 |
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| Symbol | |
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| ID | 8728823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6167443 |
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| End bp | 6168924 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003389832 |
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| Protein GI | 284039902 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.135976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA TAAATATAAA ATTGCTTCTG GGCTGCTCGG CGCTGATGCT GGCAGGCCAG
GCCTGTACGG ATCTGACCGA AACAACCTAC GACGTTATTC CTACTAGTGG AACCTTCGGT
AGTACAGCCG CACAGCAGGC AGCTCTGATT GGTCCTCTCT ACAACGGGTT GGGTGACTAT
TACGGTAACA TGTCGAACCT GAACACAACC ACGGATGAGC AGATCGTGCC AACCCGGGGA
GGTGACTGGA AAGACGGTGA CAACTGGAAA CGCCTGTACC AGCACACTTG GGATCCCATT
ACGGATAATG GGCAGTTCAA CGGCCCCTGG ACCTGGTGCT ACAACAACAT CACCAAAATC
AATCAGCAAC TGGGTACTAT TTCGGATGTT AAGACGAAGG CAGAATTACG GGCTCTTCGG
GCTTTCTTCC ACTATCAGGC TATGGATCTG TTCGGTAATG TTATTATTGC TGATGGAACA
GGGAGCGGTG CTTCAAAGCA AAGCACTCGG GCCGAGGTAT TTGCCTGGGT AGAGAAAGAA
CTGCTGGAGG TGTACCCGAA CCTGAGCGAT GTATCGGGTG GTGCCTATTA TAGCCGCATG
AACAAGTACG TGGCCGATAT GATTCTGGCT AAAATGTACC TGAATGCACA GGTGTATACA
GGCACTCCTC GTTGGGCCGA TGCCATCACG CGCTGCACGA ACATTATTTC GTCGGGTAAA
TTCCAGATTT CCGGTGACTA TCTCAGTAAC TTCTCTACAC AGAATCAGAA TTCGCCCGAA
ACGATTCTGG CAACTCCTTT TGATAAATCA AAACGGGGTG GGATGAATGT ACAAATGAAA
ACGCTCCACT ACCTGAACCA GTTGACCTAC AACATTGGTA CAGCTCCCTG GAACGGCTGG
GCAACGGTAA CTGAATTCTA CAATTCGTTC GATGACAAGG ATATCCGGAA AAAGCAGTGG
ATCGTTGGTC AGCAGTACAA AGCCGACGGT ACACCCTTGA AGGATGATGC CCTGGACATG
GTATTCCGTC CCGAAATCGA ATCGTTTACC TTCGATGCTG GTGCCAATGG TCGTTTGGCC
GGTGCCCGCA GCCAGAAATA CGAAATCCAG AAGAACAACT CATTTACCGA TCAGGATAAC
GATTTCGTTG TTTATCGTTT AGCTGACGTG TATATGATGC GTGGCGAAGC TAACTTCCGC
TTAGGCAATG TGGGCGCTGC ATTACCCGAT TTCAACATTG TTCGCAAACG GGCCGGTATG
CCGGATTATA CCAGTGCTAC ACTGACACTG GACGAAATCC TGGCTGAGCG TGGTCGTGAG
CTGGCGTGGG AGCAACACCG CCGTCAGGAT CTGATCCGCT TTGGTCAGTT CACTAAAGCA
TGGCGCTTCA AACCCGCTTC ACAGGCATAT CGCCAGCTGT TCCCGATTCC AAAGGATCAG
TTGTCGCTGA ACCCGAACCT GAAGCAGAAT CCCGGGTATT AA
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| Protein sequence | MKQINIKLLL GCSALMLAGQ ACTDLTETTY DVIPTSGTFG STAAQQAALI GPLYNGLGDY
YGNMSNLNTT TDEQIVPTRG GDWKDGDNWK RLYQHTWDPI TDNGQFNGPW TWCYNNITKI
NQQLGTISDV KTKAELRALR AFFHYQAMDL FGNVIIADGT GSGASKQSTR AEVFAWVEKE
LLEVYPNLSD VSGGAYYSRM NKYVADMILA KMYLNAQVYT GTPRWADAIT RCTNIISSGK
FQISGDYLSN FSTQNQNSPE TILATPFDKS KRGGMNVQMK TLHYLNQLTY NIGTAPWNGW
ATVTEFYNSF DDKDIRKKQW IVGQQYKADG TPLKDDALDM VFRPEIESFT FDAGANGRLA
GARSQKYEIQ KNNSFTDQDN DFVVYRLADV YMMRGEANFR LGNVGAALPD FNIVRKRAGM
PDYTSATLTL DEILAERGRE LAWEQHRRQD LIRFGQFTKA WRFKPASQAY RQLFPIPKDQ
LSLNPNLKQN PGY
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