Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4951 |
Symbol | |
ID | 8728715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6035200 |
End bp | 6036516 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389728 |
Protein GI | 284039798 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0822619 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCATC TATCACTACG CACTACACTT GGTGTTGTTA CTACATTTGC CCTGCTTACC ACGGCTTGTG AAGACCACAA GCTGGTTTCC CTGCCTAACT TTCCGGCTGT TGTCGACGCG ACCAACCCCG GCACGTTTCT GCCAACAATT CTGGCGGATG TCAATGGTGT GAAGGTGTAC AATGGGGGCT TCGGGTCGGC CATAGCTGCC GATCCGAACG ATCCGGGGGC TTTCTTTATG CTCACCGACC GCGGACCAAA CATAGATGGT ACAATTGCTA ATTCAAAAGT CTTTGCCGTC CCGGCCTTTG CTCCTCAAAT CGGCAAATTC CGGGTTAAGA ATGGCTTGAT GACACTCGAA AAAATCATTG AGTTGAAAAA TAGCGCTGGC GTTAAACTCA ATGGTTTGCC GAACCCGATC AACGTAGGTG GAACAGGTGA GCTTGCGCTG GACGTAAATG GTAACAATCT GGGAACAAGC GTTGATGGTA TCGATTCAGA AGGTCTGGCT GTGGCCTCGG ACGGTACCTT TTGGGTAAGT GATGAGTATG GCCCTCACAT TGTTCATTTC GATGCAAACG GGCAGACAAT AGAGCGTATC AACCCATTTG GTACGGGTAC CGGTGGCCGA AAAATTCCGC TTGTCTTTGC GAAGCGCCGG GCCAACCGGG GCATGGAGGG GCTAACCATT ACGCCCGATG GGAAAACGCT GGTGGGTATC ATGCAGTTTC CTCTCTACAA TCCATCCTCA GCTGCTATTT CGGGCTCCCT GGTGACGCGG ATACTAACAT TCGATATTGC GACAGGAGCC ACGAAGCAAT TCGTTTACCT GATCGAAAAG TCGAATCTAC AGGCCATTAG TGAAATTACG GCTGTATCAA ATACAACGTT TCTGGTTCTT GAGCGGGATG GTGAGTACGG TACTGATACC AATAAATCTA CCCTGTTCAA ACGTGTTTAT AAAATTGATC TGGCCGGTGC TACGGACATA TCTGACCCCG CCAATGGAGC CAACGGAAAA CTCTATGGCG GTCAAACCGT TGAAGAACTT AAAACAGCCG CTGCCTTGCA AACAAATGGT ATCGTTCCTG TAAGCAAGAC ACTTGTTCTG GATTTAGCTA CCGAAACTAC GCCCGTTTAT CCGCACGACA AGGCGGAGGG AATTGCGCTG ATAAGTCCTA CGCTGCTAGC CGTGTCAAAT GATGATGATT TTGGCGTGAC AGGCACTGGC ACTTACACCG CCAAAATACT GCCTGCTACC AATACAATCG ACAAAAACCG GGTGTATTTT ATCACCTTAA AGGCACCCGT AAAGTAG
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Protein sequence | MTHLSLRTTL GVVTTFALLT TACEDHKLVS LPNFPAVVDA TNPGTFLPTI LADVNGVKVY NGGFGSAIAA DPNDPGAFFM LTDRGPNIDG TIANSKVFAV PAFAPQIGKF RVKNGLMTLE KIIELKNSAG VKLNGLPNPI NVGGTGELAL DVNGNNLGTS VDGIDSEGLA VASDGTFWVS DEYGPHIVHF DANGQTIERI NPFGTGTGGR KIPLVFAKRR ANRGMEGLTI TPDGKTLVGI MQFPLYNPSS AAISGSLVTR ILTFDIATGA TKQFVYLIEK SNLQAISEIT AVSNTTFLVL ERDGEYGTDT NKSTLFKRVY KIDLAGATDI SDPANGANGK LYGGQTVEEL KTAAALQTNG IVPVSKTLVL DLATETTPVY PHDKAEGIAL ISPTLLAVSN DDDFGVTGTG TYTAKILPAT NTIDKNRVYF ITLKAPVK
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