Gene Slin_4923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4923 
Symbol 
ID8728687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5995610 
End bp5996146 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389700 
Protein GI284039770 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.366855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGA TACTAACACT AGCGGTATGC TGTCTATCCT TACTTACGTT TGCACAGACT 
GTACCCCAAG CGTTGCGGAT TCAGGTAAGC TACGATAAAG GCGGCCAACA TCTGGAGCAG
GCAGTAGAAA CAATAGTGGC CGTTAACACA GTAGGTAAAG CCAGTACGGT TGCTTACCAG
GCAGGTCGCT CAATAACGCT GCTACCCGGT TTTCAGGCCA GCCAAGGGAG CTTGTTCACC
GCAGACATTA AGCCCGTAGC CAGCAGAGGT AACGAATTGT CTTTGCAGCT GAAGGCATAT
CCCAACCCCT TCGATGAGTC GACAATGATT GACTACTATT TGCCGGCAGA GGGAAAGGTA
ACGATCGTAA TTATAGATGC ACAGGGGAAA ATCATCAATC AGTTGATAAA AGATGAAAAT
CAGTCGGCAG GTAAGCATCA GATTGAGTGG AATGCCACAG CGCTGAAGGC TGGTATGTAT
GTGCCAATCA TTGAACACAA TCAGAAGAAA GTGGTAGGAA GACTAGTGAA AAAATAG
 
Protein sequence
MKAILTLAVC CLSLLTFAQT VPQALRIQVS YDKGGQHLEQ AVETIVAVNT VGKASTVAYQ 
AGRSITLLPG FQASQGSLFT ADIKPVASRG NELSLQLKAY PNPFDESTMI DYYLPAEGKV
TIVIIDAQGK IINQLIKDEN QSAGKHQIEW NATALKAGMY VPIIEHNQKK VVGRLVKK