| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4587 |
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| Symbol | |
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| ID | 8728351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5559026 |
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| End bp | 5560780 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | glycosyl transferase family 39 |
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| Protein accession | YP_003389365 |
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| Protein GI | 284039435 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000502234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACGA ATTCCTCTTC TATTGACGAC CGCTGGTTTT ATGCCCTTGT TGCGGTGGGT
GTCCTGTTAA ACGCAACCGG TTTGTTCCCG CCTATTATGG AGCTCGATGG CGCCCTTTAT
GCCTGTATAG CAAAACAAAT GGCGCAAACC AACGACTTTG TGAATCTCTA TGCGGTAGGC
AGCGACTGGC TCGATAAGCC CCATTTTCCG TTCTGGGTAA TTGCACTGAG TTACAAAGTT
TTTGGCATCA ATACGTTTGG CTACAAATTT CCGGCCCTGC TGTTTTTCCT GGGCAGTGTT
GTATACACCT ATAAATTTGC CCGGCTGACG TACCCCAAAG TCGTTGCTCA GCTTGCCGCG
CTGGTTTTAC TGACAGCTTT CCACGGCGTA TTATCCAACA GCGATGTACG GGCCGAGCCC
TACCTGATGC CGCTGATCAT TGGAGCTGTT TACCATTTCT ACCGTGTCTT TCTGGGCGAC
AGAGATGACA GTAATGCCAC ATCTCAACGA TATGGCGTCT CCCAAGGCTG GCTTCACCTC
GCTATCGGCT CCTTTCTAAC TGGCTGCGCC CTGATGACCA AAGGCGTTTT TGTGCTTATC
CCAATCGGTG GCGGCTTAGT CATTCACTGG CTGTTAACGG GCCAGTGGCG GGAGCTACTC
AAGCCTCGTT GGTACGTGGC CGTAGTCCTG TCCTTTGTGT TTACCCTTCC CGAGATATAC
TGCCTCTATC AGCAATTCGA CATCCACCCC GAAAAGGTTG TTTTTGGACA GAGGGGTGTA
TCGGGCGTTC GATTCTTTTT CTGGGACAGC CAGTTCGGAC GGTTCTTCAA TACGGGGCCG
ATCAAAGGCG AAGGAGACAA GTTTTTCTTT GTCCACACGC TGCTGTGGGC GTTTTTGCCG
TGGTCGTTAC CCCTCTATAT TGGCATTGGA AAGGTGCTCC GGGACTTGGT CAAACACCAA
CCAGCCTCTG ATCCATCACC ATCCATAGAA TATGTTTCTC TGGGGTCTGG CCTGCTTACC
TTTCTCCTGT TCTCGTTTTC GGGTTTTCAG TTGCCCCATT ACATGAACAT TGTATTCCCG
TTCTTTGCCC TGCTGACCGC TCAGTTTCTG GTTAGCCTCG CCCCTGCTAC GCTCCGTAAG
TGGACCATTG GACAAACAGC TATTAGCCTG GCAATCGTGG GACTATCCAT TGCCCTATTA
CTATTCGTTC AACCCGAAAA TGTGGTAGGC GCGGTGGTTT TAGTCATCGT TACAACCCTG
GCGATTTTCA CACTCTTCCG GCAGAACACG CTTTTATCGC TGTCGGGACG CATGGTGGGA
GCGATGCTGA TTCTGGCCGG TACACTGAAC CTGTTTTTGT ACCCGACGTT TCTGCGGTAT
CAGGCCGGTA TGGCAGGGGC TCAGTACGTC AACGGCGATG CCAAACTCGC CAAACGGCCA
ACCGTTCTGT ATGAACCCGG CACGGGTGTG GGCGGGGGCA GTTTCTGGTC GTACGAGTTT
TACGTACGCT CCCCTACCGT TTACGCCCGC TCCGATTCGT CCCTCATGAT TCAACTACAG
TCAGGCTCCC GGCAGGTGTT TACCAGTGGT GCCGATGCCG ATTCGCTGGC ATCGCGCGGG
TTTCAGGTAA AGCATCTGGC CGTGTTTCCA TATTACCACG TGAGCCAGCT AACGTATGAG
TTTCTGAATC CCGCTACCCG CTCGCAAACC CTGGAGCCCT ATGTACTGGC CGAGGTAGGA
CCAAAGAAAG AGTGA
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| Protein sequence | MTTNSSSIDD RWFYALVAVG VLLNATGLFP PIMELDGALY ACIAKQMAQT NDFVNLYAVG
SDWLDKPHFP FWVIALSYKV FGINTFGYKF PALLFFLGSV VYTYKFARLT YPKVVAQLAA
LVLLTAFHGV LSNSDVRAEP YLMPLIIGAV YHFYRVFLGD RDDSNATSQR YGVSQGWLHL
AIGSFLTGCA LMTKGVFVLI PIGGGLVIHW LLTGQWRELL KPRWYVAVVL SFVFTLPEIY
CLYQQFDIHP EKVVFGQRGV SGVRFFFWDS QFGRFFNTGP IKGEGDKFFF VHTLLWAFLP
WSLPLYIGIG KVLRDLVKHQ PASDPSPSIE YVSLGSGLLT FLLFSFSGFQ LPHYMNIVFP
FFALLTAQFL VSLAPATLRK WTIGQTAISL AIVGLSIALL LFVQPENVVG AVVLVIVTTL
AIFTLFRQNT LLSLSGRMVG AMLILAGTLN LFLYPTFLRY QAGMAGAQYV NGDAKLAKRP
TVLYEPGTGV GGGSFWSYEF YVRSPTVYAR SDSSLMIQLQ SGSRQVFTSG ADADSLASRG
FQVKHLAVFP YYHVSQLTYE FLNPATRSQT LEPYVLAEVG PKKE
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