| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4555 |
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| Symbol | |
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| ID | 8728319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5522197 |
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| End bp | 5524401 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003389334 |
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| Protein GI | 284039404 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000444386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATC TTTTCTCAAT TGGACTGCTC CTCTTTAGTG CCTTTTCTTC ATTCGGACAA
ACCAGTCTTT TGATTCGGGT TGAAGACAGC CTAACCCATG CCCCCGTTAT TGCGGCCACC
GTTCGTACGC CTTCAAAACC CGTAATCGGC AATGTCACCG ATGCGAATGG CCTAACCAGA
CTAACCAATG TACCGGCTAC TGTTAAAACC CTGGTGGTTA GCGCCGTTGG CTACGAAACC
GAGTCATTTC CGATAACTAC TACCGCCGAC ACCCTTGTTT TTCGGCTTCA TAGTCAGGAT
GAATCACTCG ATGAAGTGAC CGTTACGGCT ACCCGAACCA ACTCCCGAAT CGAAGACCTG
CCCATTAAAG TGGAAGTACT GGGGCAGGAG GATATGGATG AAGAAAGCGC GGTCGTTCCC
GGCAACGTGA GCAGCATTCT GGGCGACATT TCCATTATCC ATATCCAGCG AACATCGGCC
GTCAACGGCA ATCAGGCCAT TCGAATGCAG GGGCTCGACC CTAAATACAC GCAGATTCTG
CGCGATGGAC TACCGCTTTA CGAAGGATTT TCGGGCAACC TAGGCGTCTT GCAGATCCCA
CCCCTGGATT TAAAACAGGT GGAGGTGGTG AAGGGCTCCG TGTCGACGCT GTATGGCGGT
GGAGCTATTG GTGGTATGAT CAACATCGTA TCGAAATCAC CCACCTCCGA AAAACCCACG
TTTACGGCTC TCCTTAACCG GTCGGGCCTG AAAGAAAGTA ACAGTAACGC CTATTATTCG
CAACGCTACG GTAAAACAGG GCTGACGTTA TTTGCGGGCT ATACCAACCA GCAAGCCGTC
GACGTAACGG GCGATGGCTA CACCGATAGC CCGGAAATCA AACAAGTCAA TTTCCACCCG
AAGTTTTTCT ACAACCCCAC GGATCATACG CGGATGAACA TTGGGTACTC GTTCACCGAC
GAACACCGCG AAGGTGGCTA TTTGCCAGCG CTGGAAGGTA CTCAACCAAA TGCCTACCGC
AATATCACCG ACCTGCAACG GCACACGGTC GATTTCGACG CCAGCCATAA CACGTCTGAG
ACCAACGCCA TTACGCTGAA AGGTGCTCTG AGTACGTTCC ACCGCCAAAA TACCGATTAC
CAGAAACTCT CCGACGGGCG ACAGTCGTCG CTCTATCTGG AAGGGAACAA TCTAAAACGC
TTTGGCAAAC ACCAGCTCAT CGTTGGTGCC AACCTAACCG TTGAGGCTTT CCGCAAGAAC
CCTGACAGCA CCCGGTTGGT CGATTATACC TACCAAACCA TCGGTGGCTT CGTGCAGGAC
GACTGGCAGG TGGGCTCAAC AGTAGCGGTA CAGGCGGGCC TTCGGCTCGA TCACCACAAC
ACGTTCGGAA ATTTCCTGCT ACCCCGTTTA TCGGTTAAAC TGAAACCTTC CGAGCCGTGG
ACCGTTCGAC TGAGCGTTGG AACGGGCTAC AAAACGCCCA ACCTGTTTGT CAACCAGACG
CCCGGCGCGT TGAACGTAAG TCTGATTTTT CCGCGTCTGC TGCCCATCGA TGTGGCGAAT
GTGAAAGCCG AAAAATCGGT GGGTGCCAAC ATGGATATTG CGTACTTAAA AACCTTTGAA
AGTGGCTTGT CGGTACAGGT CGACCAGGCA TTTTATTACA CCTATGTCAA CTCGCCGGTG
GTATCAGCCT TTGCCAGCAC GTCGAGCAAT CTGGGCGCTT ACACCCAACT GATCAATGCG
CCGTACAACC TGCTTAGCCT TGGCACTGAC ACTTACGTTC GGCTGGAGTA CGACGAATTA
GAACTCTACC TGGGCTATAA CCACACGCTA TCCCGGCGCG ATGGCCCGTC CAGTCTGGGC
CCCTCTGATA ACACGTACCT CCCTCTAGCT CCTCAGGACA AATTTTCAAC CACCCTGGCC
TGGGAACCGG AGCACTTCCG ATTTGGCATA GAAGCGGCTT ATGTGGGTTC CCAGTACCTG
TACAACAACC AGAAAGTAGC AAATTACTGG TTCTTTGCGG GAGCCGCCGA ATACCATTAC
AACGATCACT GGCGACTCGT GCTGAACGCC GAAAACCTCT TCAATATCAA GCAGGCTAAT
TACGAAACCG TTGTCAGCGG TCCTGTTACG CAACCCACCT TCCGGCCCAT CTGGGCACCA
TTGGAAGGCC GGATTGTAAA TCTGGCACTG AAGTTTACGT TGTAA
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| Protein sequence | MKHLFSIGLL LFSAFSSFGQ TSLLIRVEDS LTHAPVIAAT VRTPSKPVIG NVTDANGLTR
LTNVPATVKT LVVSAVGYET ESFPITTTAD TLVFRLHSQD ESLDEVTVTA TRTNSRIEDL
PIKVEVLGQE DMDEESAVVP GNVSSILGDI SIIHIQRTSA VNGNQAIRMQ GLDPKYTQIL
RDGLPLYEGF SGNLGVLQIP PLDLKQVEVV KGSVSTLYGG GAIGGMINIV SKSPTSEKPT
FTALLNRSGL KESNSNAYYS QRYGKTGLTL FAGYTNQQAV DVTGDGYTDS PEIKQVNFHP
KFFYNPTDHT RMNIGYSFTD EHREGGYLPA LEGTQPNAYR NITDLQRHTV DFDASHNTSE
TNAITLKGAL STFHRQNTDY QKLSDGRQSS LYLEGNNLKR FGKHQLIVGA NLTVEAFRKN
PDSTRLVDYT YQTIGGFVQD DWQVGSTVAV QAGLRLDHHN TFGNFLLPRL SVKLKPSEPW
TVRLSVGTGY KTPNLFVNQT PGALNVSLIF PRLLPIDVAN VKAEKSVGAN MDIAYLKTFE
SGLSVQVDQA FYYTYVNSPV VSAFASTSSN LGAYTQLINA PYNLLSLGTD TYVRLEYDEL
ELYLGYNHTL SRRDGPSSLG PSDNTYLPLA PQDKFSTTLA WEPEHFRFGI EAAYVGSQYL
YNNQKVANYW FFAGAAEYHY NDHWRLVLNA ENLFNIKQAN YETVVSGPVT QPTFRPIWAP
LEGRIVNLAL KFTL
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