Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4500 |
Symbol | |
ID | 8728264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5454578 |
End bp | 5456149 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_003389279 |
Protein GI | 284039349 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTACC TGAACCGTGG CCTGCTGACA TTCGGGCTAA TGAGTGCGGT GCTGGCTGGC CTGACAACAG GAGCACGCGC CAAAACTCCG ATTCAACTGG ACAGTACAAT CGTCAAAAAA GACACTATTG CGCTCGTACC AACGGTGCCC GACAGTTTGT TACGTGGGCG GCTGGCGAAG CTGCAAAAAT CTATTCCATT GAATTACCAC AAGGCCGTAC AGGCTTATGT GGACTACTTC ACGTTCCGCA AAGCCAGCAC TACCAAGACA ATGCTGGAAC GTATGCCCCT TTTCTTTCCG CTCTATGAGC GCGTGCTGGC TCAGTACGGT CTCCCCGATG AATTCAAATA CCTGTCAATT GTCGAGTCGG CGCTGAATCC ACGGGCTATT TCGAGAGCAG GTGCCGGGGG CCTCTGGCAG ATTATGCCCG GCACCGGCCG CGATTTACGG CTGTATCAGG ACGATTATGT CGATGAGCGC ATGGACCCCG TTAAAGCAAC GGAAGCCGCC TGTAAATACC TGCGCGATCT GTATAATATC TTTGGCGACT GGGAGCTGGC GATGGCCGCC TATAACTGTG GCCCAAATGC GGTCAAACGT GCTATGCGCC GGTCGGGGGG CGATTCCTTC TATACAATTT ACGATGCACT GCCGAAAGAA ACCCGCGGCT ATGTACCGCA GTTTGTCGCG TTTACCTACC TGATGAATTA CGCCAGTGAT CACGGTATTG TAGCCGAAAA GTATGAATAC CCCATTCCTC ACGATACCAT TCAGGTGAGT GGCTACTTCA ACCTCGAAAC GTTTGCCAAA CACAGCAGTA TGGCATTGGC CGATCTGCAA AAAATGAATC CGGCCATCAC AACAACCATT TTACCGGAAT ACACAAACCA TTACCCGCTC CGGGTGCCTC GGGAACAGTA CGGCTATTTT GCCAGTCGCA GACGAGCCAT TCTGGACTCA GCGAGCCGAC GCCCAAATGT TATGGAGCAT AGTTTGCTGG CAAGTGCTGA AGATGTTCGG TATGGCACCG ATACAATGGG TGCCTGGAAT GAACTAGGCC GAAACCCACT GGCACGTATC AGTCTGGGAG AACCGCTGAC AGACCGGGTA AACGATGAGG CAAGACTCGC GAATGCCGAA TCGGCCGATG AGCCCGAAGA AGATATCGAA ACGGTGGTGT TGCGTAAGCC TAAAAAGCAA ACCTACGTTG TCAGAAAAGG CGATAACTTA TTGCAAATTG CCAACCGGTA CAACGTCGAA CTTTACGATC TAAAGCGCTG GAACCATTTA CGGTCTACCA GTATCCGGCG GGGACAAAAA CTGGTTATCC TGAAAGAGGT TGCCGAAACC CGTGCTGAGC GACTCGCCGA TCAGGGAACC GCTAAAAGCC GTAAAAAAGC TGAAGTACTG GCAAAGTCGA AGCATTACAA ACCCCGCTAC CACCGCGTAC AAAGTGGTGA TACGCTCTGG AACATCGTTC AGCGGTACGA CCTAACCATC GACCAGCTTA AACGAATGAA CCACATCCGG AGTAATTCAT TACGGCCCGG TCAAAAACTG ATAGTAGGGT AG
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Protein sequence | MNYLNRGLLT FGLMSAVLAG LTTGARAKTP IQLDSTIVKK DTIALVPTVP DSLLRGRLAK LQKSIPLNYH KAVQAYVDYF TFRKASTTKT MLERMPLFFP LYERVLAQYG LPDEFKYLSI VESALNPRAI SRAGAGGLWQ IMPGTGRDLR LYQDDYVDER MDPVKATEAA CKYLRDLYNI FGDWELAMAA YNCGPNAVKR AMRRSGGDSF YTIYDALPKE TRGYVPQFVA FTYLMNYASD HGIVAEKYEY PIPHDTIQVS GYFNLETFAK HSSMALADLQ KMNPAITTTI LPEYTNHYPL RVPREQYGYF ASRRRAILDS ASRRPNVMEH SLLASAEDVR YGTDTMGAWN ELGRNPLARI SLGEPLTDRV NDEARLANAE SADEPEEDIE TVVLRKPKKQ TYVVRKGDNL LQIANRYNVE LYDLKRWNHL RSTSIRRGQK LVILKEVAET RAERLADQGT AKSRKKAEVL AKSKHYKPRY HRVQSGDTLW NIVQRYDLTI DQLKRMNHIR SNSLRPGQKL IVG
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