Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4447 |
Symbol | |
ID | 8728207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5391300 |
End bp | 5392172 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | Aldose 1-epimerase |
Protein accession | YP_003389227 |
Protein GI | 284039297 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.840638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACTT TAGAAAATGA CCATCTCCGC GTCGTCATTC AGCCCAAAGG TGCCGAACTG ACCTCTATCT TTCATAAACC ATCGGGTATC GAGCACCTCT GGCAGGCCGA TCCATCGATA TGGGGCTGGC ATGCGCCGAA CCTGTTTCCG GTAGTAGGCG GGTGTCTGAA TAATCAATTG CTGATCGGAG GAGAAACGTA TCCGATTGAG CGGCATGGCT TTACCCGTCA GTCGGTTTTT GAGAATACAG AGTCGACCCG AACACATGCT ATATTCTCCT TACGATCGAG CGATGCGACC CGTGTACATT TTCCGTACGA GTTCGAGTTT CAGATTATCT ATGAACTGGA TGGACCAAAA CTGACGGTTA CGTATCGGGT GGTGAACGAA GATGAACAGA CGATATTCTT CTCGGTAGGG GCACATCCTG CTTTTGCCGT GCCGTTTAAG GCTAGAGAAG CCTATGAGGA TTACTTTCTG GAGTTTGAGA AAGCAGAATC GCTGGAAACG CACATGCTTT CGTCAGGAGG GTACTTTACC GGAGAAACTA AGTCGGTTCC TACAGTCGAT GGTAATAAAC TGCCGTTGAC AAAGCACTTG TTTGATGCTG ATGCGCTCGT GTTCAAGAAC CTAGAGTCTC GCCGGGTAAC GATCCGAAGC GCCAGGCACG ATCAGAGGTT ATCGGTCGAC TACCTGGCTT TCCCTTATTT GGGTGTCTGG GCCAAGCCGG GGGCGCCTTT TGTTTGTATA GAACCCTGGC TGGGCTGTGC AGACAGCGAA GGTAAGCCAA GGCCGATTCA GGACAAGGAA GCCATCCAGC AGTTGGCAGA AGGAAAGGTG TTTGATGCCG CCTTTACAAT TACGGTAAGT TAA
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Protein sequence | MTTLENDHLR VVIQPKGAEL TSIFHKPSGI EHLWQADPSI WGWHAPNLFP VVGGCLNNQL LIGGETYPIE RHGFTRQSVF ENTESTRTHA IFSLRSSDAT RVHFPYEFEF QIIYELDGPK LTVTYRVVNE DEQTIFFSVG AHPAFAVPFK AREAYEDYFL EFEKAESLET HMLSSGGYFT GETKSVPTVD GNKLPLTKHL FDADALVFKN LESRRVTIRS ARHDQRLSVD YLAFPYLGVW AKPGAPFVCI EPWLGCADSE GKPRPIQDKE AIQQLAEGKV FDAAFTITVS
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