Gene Slin_4447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4447 
Symbol 
ID8728207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5391300 
End bp5392172 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content50% 
IMG OID 
ProductAldose 1-epimerase 
Protein accessionYP_003389227 
Protein GI284039297 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.840638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTT TAGAAAATGA CCATCTCCGC GTCGTCATTC AGCCCAAAGG TGCCGAACTG 
ACCTCTATCT TTCATAAACC ATCGGGTATC GAGCACCTCT GGCAGGCCGA TCCATCGATA
TGGGGCTGGC ATGCGCCGAA CCTGTTTCCG GTAGTAGGCG GGTGTCTGAA TAATCAATTG
CTGATCGGAG GAGAAACGTA TCCGATTGAG CGGCATGGCT TTACCCGTCA GTCGGTTTTT
GAGAATACAG AGTCGACCCG AACACATGCT ATATTCTCCT TACGATCGAG CGATGCGACC
CGTGTACATT TTCCGTACGA GTTCGAGTTT CAGATTATCT ATGAACTGGA TGGACCAAAA
CTGACGGTTA CGTATCGGGT GGTGAACGAA GATGAACAGA CGATATTCTT CTCGGTAGGG
GCACATCCTG CTTTTGCCGT GCCGTTTAAG GCTAGAGAAG CCTATGAGGA TTACTTTCTG
GAGTTTGAGA AAGCAGAATC GCTGGAAACG CACATGCTTT CGTCAGGAGG GTACTTTACC
GGAGAAACTA AGTCGGTTCC TACAGTCGAT GGTAATAAAC TGCCGTTGAC AAAGCACTTG
TTTGATGCTG ATGCGCTCGT GTTCAAGAAC CTAGAGTCTC GCCGGGTAAC GATCCGAAGC
GCCAGGCACG ATCAGAGGTT ATCGGTCGAC TACCTGGCTT TCCCTTATTT GGGTGTCTGG
GCCAAGCCGG GGGCGCCTTT TGTTTGTATA GAACCCTGGC TGGGCTGTGC AGACAGCGAA
GGTAAGCCAA GGCCGATTCA GGACAAGGAA GCCATCCAGC AGTTGGCAGA AGGAAAGGTG
TTTGATGCCG CCTTTACAAT TACGGTAAGT TAA
 
Protein sequence
MTTLENDHLR VVIQPKGAEL TSIFHKPSGI EHLWQADPSI WGWHAPNLFP VVGGCLNNQL 
LIGGETYPIE RHGFTRQSVF ENTESTRTHA IFSLRSSDAT RVHFPYEFEF QIIYELDGPK
LTVTYRVVNE DEQTIFFSVG AHPAFAVPFK AREAYEDYFL EFEKAESLET HMLSSGGYFT
GETKSVPTVD GNKLPLTKHL FDADALVFKN LESRRVTIRS ARHDQRLSVD YLAFPYLGVW
AKPGAPFVCI EPWLGCADSE GKPRPIQDKE AIQQLAEGKV FDAAFTITVS