Gene Slin_4323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4323 
Symbol 
ID8728083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5241412 
End bp5242470 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content54% 
IMG OID 
Productmajor royal jelly protein 
Protein accessionYP_003389104 
Protein GI284039174 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.230264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAACG GCAACGGTCA GGCTGGCAGA CAGATGTCAG ACGTCCAGTT AATATCGGCC 
TATCAATCGA ATATGATCTG GAATGGCGTC ACCACAACCA CCCATGGACG CGTTTTCGTT
TGTTTTCCAC GTCAGGCAGG AGAAGCAGGT CTGCGAGTCG GCGAAATAAG AGCTGATGGC
AAGGTTGTTC CCTACCCCGA TGAGGGCTGG AATACCCTTC CTGCCGACCG AGCGACCCGC
CCAACGTTTA TCCGGGTCCG CTCCCTGCGG ATTGGCCCCG ACCATAATTT GTGGGTTGTG
GATACGGGGC ATGCTCAGGC GAGACCTGAG CCGTATATTG AGGGAGCTAA ACTGGTTGTT
ATTGAGGTCG AAACGAATCA GGTGATACGG ATTATCCCAC TGGATGACGT GGTAAACGTC
AACAGTCTGG TCGACGATGT TCGCATTACT CCGTCGCATA TTTACCTGAC CGATGCAGGA
GCGCCCGCGC TGATTGTGAT CGACCGGCAA TCGGGTCGGG GACGCCGGAT TCTGGAAAAC
GACGATTCAG TAACCGACAT GCGGCCCATA CTGGCCGAAG GGCAGATTAT GCGTTACCCG
AACGGCGAGG AAGTACGCAT CCATGCCGAT CAGCTGGAAG TGTCGCCCGA TGGCCGATAC
CTGTATTTTC AACCGGCATC GGGATTGATG AGCCGAATCG ACACTTTTTT CGTAAACGAT
GCCACTCTGC TTCCTGCCGA CCTTACGAAA CAGGTGCAGC TCTTTGTCGA CACACCGGGA
ACGGGCGGAA CCACGATCGA TGCCGATGGC AACATTTATC TGTCGGATGT CAATCAGTCG
CGGATTCTGA AGATTACGCC CGATGGAAAG ACCTCGATTC TCATTGCGGA TTCCCGGCTT
GTCTGGGTAG GTTCGATGTG GATCGATCAG GCTGGATTCC TGTGGCTTCC GGCGGGACAA
CTTAACCGGA CGGCCACTTT CCAGCAGGGA AAATCGGCCG TCGTTTATCC TGTACATCTC
TATAAACTTC AGATCGGGTC AACACCCGTT CGCCACTAA
 
Protein sequence
MVNGNGQAGR QMSDVQLISA YQSNMIWNGV TTTTHGRVFV CFPRQAGEAG LRVGEIRADG 
KVVPYPDEGW NTLPADRATR PTFIRVRSLR IGPDHNLWVV DTGHAQARPE PYIEGAKLVV
IEVETNQVIR IIPLDDVVNV NSLVDDVRIT PSHIYLTDAG APALIVIDRQ SGRGRRILEN
DDSVTDMRPI LAEGQIMRYP NGEEVRIHAD QLEVSPDGRY LYFQPASGLM SRIDTFFVND
ATLLPADLTK QVQLFVDTPG TGGTTIDADG NIYLSDVNQS RILKITPDGK TSILIADSRL
VWVGSMWIDQ AGFLWLPAGQ LNRTATFQQG KSAVVYPVHL YKLQIGSTPV RH