| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4275 |
|---|
| Symbol | |
|---|
| ID | 8728034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5158534 |
|---|
| End bp | 5159508 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | 6-phosphofructokinase |
|---|
| Protein accession | YP_003389058 |
|---|
| Protein GI | 284039128 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.280686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAG TAGCTGTTTT TACCTCGGGT GGCGACGCAC CGGGTATGAA CGCCTGTATC
CGGGCTGTTG TTCGGGGGGC GGTCTATCAC GGCATTGAAG TGTTCGGTAT CCGCCGGGGG
TACAGCGGAA TGATAAATGG CGATATTTTT CAGATGACTT CGCACTCGGT GAGCAACATC
GTACAGCGTG GAGGCACTAT CCTGAAATCG GCCCGCAGCA AAGAGTTCAT GACGCCGGAA
GGGCGCGCAA AAGCCTACGA ACAACTCAAG AAATTCGATA TTGAAGGTCT GGTTGCTATT
GGCGGTAACG GCACCTTTAC GGGTGCTACG CTTTTCTTCG ACGAATACGG TATTCCAACC
GTTGGCGCAC CCGGCACGAT CGATAACGAC CTTTACGGAA CTGACCATAC GATTGGCTTC
GACACCGCCG TGAACACGGC CCTGGAAGCC ATTGATAAAA TTCGCGATAC GGCCGACTCC
CACGACCGTA TTTTCTTCAT TGAAGTGATG GGCCGCGACT CCGGTTATAT CGCGATTCAG
TCGGGTATTG CCGGTGGTGC TGAAATGGTA ATGGTACCAG AAGTACTGAC GCCAATTTCT
GAAGTTGTCG AAACGCTGAA ATCGGGCTGG AGCCGCCAGA AATCATCGTC CATCGTTGTC
ATTGCCGAAG GGGAAGAAGC CGGAAATGCG ACCGAGATTG CCGAGAAAAT ACGCCTTCAG
GTTCAATCTA CCATCGATAT GCGGGTTACA ACCCTTGGGC ACATTCAGCG CGGTGGCATT
CCTACGGCTT ACGACCGGAT TCTGGCCAGC CGCCTGGGTC TTGGTGCCCT GGAAGGCCTG
ATGAATGGCG AACAGAACGT AATGGCCGGG ATTATCAACA ATGAGCTGGT CTATACCCCG
TTCCGTGATA CCATCCGCCT GCCGAAGCCA ATCAGCGAGG ATTTGCTCCG GATGGTGAAG
ATTTTATCTG TGTAA
|
|---|
| Protein sequence | MKRVAVFTSG GDAPGMNACI RAVVRGAVYH GIEVFGIRRG YSGMINGDIF QMTSHSVSNI
VQRGGTILKS ARSKEFMTPE GRAKAYEQLK KFDIEGLVAI GGNGTFTGAT LFFDEYGIPT
VGAPGTIDND LYGTDHTIGF DTAVNTALEA IDKIRDTADS HDRIFFIEVM GRDSGYIAIQ
SGIAGGAEMV MVPEVLTPIS EVVETLKSGW SRQKSSSIVV IAEGEEAGNA TEIAEKIRLQ
VQSTIDMRVT TLGHIQRGGI PTAYDRILAS RLGLGALEGL MNGEQNVMAG IINNELVYTP
FRDTIRLPKP ISEDLLRMVK ILSV
|
|---|
| |