Gene Slin_4151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4151 
Symbol 
ID8727910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4999314 
End bp4999862 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF1003 
Protein accessionYP_003388937 
Protein GI284039007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTA CCCATGGCCA GCCTAGGTCG GATCAGGACG GGCCGTCCAG CATGGCCCGT 
ATCGTTGACC GAAATATTAA AGCCCTGCTG GCACGTCGGC AAGCCGAGCA GGAAAACCGA
AATACATCGA ATAAACTAGC CGACCGGGTT ACCAATTTTG CCGGAAGCTT ACAATCCGTC
TGGATTCATC TGGCGATTTT TGGCGGTTGG ATTGTCTGGA ATATGGGCTG GCTGGGCCTG
TCGCCATTCG ACCCCTCGCT GGTGGTACTG GCTATGGTAG CTTCGGTAGA ATCCATCTTC
CTGTCTACGT TTGTGCTGAT CAGCCAGAAC CGAATGGCCA CTCTGGCCGA CAAACGCGCC
GATCTCGACT TACAGGTGAG CCTCCTGGCC GAACACGAAA TTACAAGGCT GGTGATACTG
GTCACAGAAA TAGCGAAGAA GATGGACATT GCCGCTGCCG ATGACCCCGA AATGCAGGAG
TTGGCTCAGG ACATACATCC GGAGAAGGTG CTGGATACCC TGGAACGCCA CGAAAAAGAG
GCCCGTTAA
 
Protein sequence
MEFTHGQPRS DQDGPSSMAR IVDRNIKALL ARRQAEQENR NTSNKLADRV TNFAGSLQSV 
WIHLAIFGGW IVWNMGWLGL SPFDPSLVVL AMVASVESIF LSTFVLISQN RMATLADKRA
DLDLQVSLLA EHEITRLVIL VTEIAKKMDI AAADDPEMQE LAQDIHPEKV LDTLERHEKE
AR