Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4151 |
Symbol | |
ID | 8727910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4999314 |
End bp | 4999862 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | protein of unknown function DUF1003 |
Protein accession | YP_003388937 |
Protein GI | 284039007 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTTA CCCATGGCCA GCCTAGGTCG GATCAGGACG GGCCGTCCAG CATGGCCCGT ATCGTTGACC GAAATATTAA AGCCCTGCTG GCACGTCGGC AAGCCGAGCA GGAAAACCGA AATACATCGA ATAAACTAGC CGACCGGGTT ACCAATTTTG CCGGAAGCTT ACAATCCGTC TGGATTCATC TGGCGATTTT TGGCGGTTGG ATTGTCTGGA ATATGGGCTG GCTGGGCCTG TCGCCATTCG ACCCCTCGCT GGTGGTACTG GCTATGGTAG CTTCGGTAGA ATCCATCTTC CTGTCTACGT TTGTGCTGAT CAGCCAGAAC CGAATGGCCA CTCTGGCCGA CAAACGCGCC GATCTCGACT TACAGGTGAG CCTCCTGGCC GAACACGAAA TTACAAGGCT GGTGATACTG GTCACAGAAA TAGCGAAGAA GATGGACATT GCCGCTGCCG ATGACCCCGA AATGCAGGAG TTGGCTCAGG ACATACATCC GGAGAAGGTG CTGGATACCC TGGAACGCCA CGAAAAAGAG GCCCGTTAA
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Protein sequence | MEFTHGQPRS DQDGPSSMAR IVDRNIKALL ARRQAEQENR NTSNKLADRV TNFAGSLQSV WIHLAIFGGW IVWNMGWLGL SPFDPSLVVL AMVASVESIF LSTFVLISQN RMATLADKRA DLDLQVSLLA EHEITRLVIL VTEIAKKMDI AAADDPEMQE LAQDIHPEKV LDTLERHEKE AR
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