Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3956 |
Symbol | |
ID | 8727714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4747230 |
End bp | 4748579 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003388745 |
Protein GI | 284038815 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.621866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.612872 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCGC CAGCTTCTAT ACCGCGCCAA CCTAACACTT TAACCCCTAC CCCTGTGACT ACTTCCAAAA CCCATAATTA CCGGTGGATT ATCGTCGTCC TGTTATTCAC CGCAACCACA ATCAACTACC TCGACCGGCA GATCATCGGT CTGCTGAAAC CCATTCTGGA AGTTGAATTT TCCTGGACCG AAACACAGTT TGCCAACATC GTGATCGCCT TCACGGCAGC CTATGCCGTT GGTCTTTTAG TGTTCGGCTG GTTTATCGAT AAGGTTGGCA CAAAAATAGG ATACGCCGTC ACAATCGTCT GGTGGAGCGT GGCCGGTATG CTGCACGCGC TGGCCCGCAG TGCGTTTGGT TTTGGTTTGG CCCGCGTAGG GTTAGGGCTG GGCGAAGCAG GGAATTATCC AGCCGCCGTG AAGACCGTTG CCGAGTGGTT TCCCCAGAAA GAGCGTGCCC TGGCAACGGG TCTATTTAAC GCCGGTACAA GCATTGGCGT GGTGGCGGCC CTGCTCATTG TACCCTGGAT TTTGAGCCAT TACGGCTGGC AGGAAGTGTT CTGGATTACG GGTGCTATGG GCTTTGTCTG GCTCATTTTC TGGCTCATTT TCTATGAAGT TCCAGCGCGG CAGCAACGGC TGTCGGCTGA GGAGTATGAT TACATTACCA GTGGTCAGGA AGCAGAAACC GAAAAGAAGC TGCCTATCAA GTGGTTCAGG TTGTTTACCC TTCCGCAGAC CTGGGCGCTC ATCACCGGCA AAGGACTTAT CGACCCCATT TACTGGTTTT TCCTGTTCTG GCTCCCTTCC TATTTCTCGT CGACATTTAA GCTGGACCTT AAGAAACCCA GTCTGGAGCT GATGCTCATT TATCTGGCCA CCACCGTGGG CAGCATTGGT GGCGGGTATT TATCGTCATG GCTCATCAAA CGCGGCTGGC CGACGCTGAA AGCCCGAAAA ACCGTTTTGA TCATATTTGC CGGGTTGGAA TTATCCATTA TCCTTGCTCA ATTTGCGACG GATGTCTGGG TAGCGGTGGG GCTGATCAGT CTGGCGGTGG CCGTTCACCA GGCCTGGGCG ACCAACGTGT TTACGATGGC GTCTGATTTA TTCCCTAAAC AAGCGGTCAG TTCGGCCGTT GGTATAGCGG GGATGGCCGG AGCCGTGGGC GGAATTTTCT TCCCGATGCT AGTCGGTCGT TTGCTGGACA CCTACAAAGC GGCTGGCAAT CTGTCGGGGG GTTACAACGT ATTATTCACC ATCTGCGGAT TTACGTACCT GACAGCCTGG GTTATCATCC ACCTGCTTAC CCGAAAGCCT AAACCAGTCG ATATAAGCCA ACTGACGTAA
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Protein sequence | MPAPASIPRQ PNTLTPTPVT TSKTHNYRWI IVVLLFTATT INYLDRQIIG LLKPILEVEF SWTETQFANI VIAFTAAYAV GLLVFGWFID KVGTKIGYAV TIVWWSVAGM LHALARSAFG FGLARVGLGL GEAGNYPAAV KTVAEWFPQK ERALATGLFN AGTSIGVVAA LLIVPWILSH YGWQEVFWIT GAMGFVWLIF WLIFYEVPAR QQRLSAEEYD YITSGQEAET EKKLPIKWFR LFTLPQTWAL ITGKGLIDPI YWFFLFWLPS YFSSTFKLDL KKPSLELMLI YLATTVGSIG GGYLSSWLIK RGWPTLKARK TVLIIFAGLE LSIILAQFAT DVWVAVGLIS LAVAVHQAWA TNVFTMASDL FPKQAVSSAV GIAGMAGAVG GIFFPMLVGR LLDTYKAAGN LSGGYNVLFT ICGFTYLTAW VIIHLLTRKP KPVDISQLT
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