| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3779 |
|---|
| Symbol | |
|---|
| ID | 8727537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4544009 |
|---|
| End bp | 4545055 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | Alcohol dehydrogenase zinc-binding domain protein |
|---|
| Protein accession | YP_003388573 |
|---|
| Protein GI | 284038643 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.167935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACAAG CGAGGGGCTA TGCGGCTCTG GGTTCTTCCC AGGCGCTGCG CCCATATGCA
TTTGAGCGGA AAGAGGTAGA CGCTCGCCAG GTTCTGATTC GTATTCTTTA CTGCGGCATC
TGCCATGCTG ACATTCACCA GGCCCGCAAT GAATACGGCA ACACCCACTA TCCACTGGTT
CCCGGCCACG AAATCGTGGG CCGAATTGAG CGGGTTGGCC CGCTGGTCAC TCAGTTCAAC
GCAGGTGATT TGGTCGGGGT TGGTTATTTT ATAGATTCCT GTCGGCACTG TTCCAGTTGC
GCGGAAGGCG AGGAGCAGTT TTGTGAAACA GGACTATTGC CTACCCAGAA CGGTAAACTT
CCTGATGGCA GTACGACGAA AGGCGGCTAT TCGGACGTTA TCGTGGTGGA TGAGCGGTAT
GTCCTGCATA TTTCCGAACG GTTGGATGCC CCCGCCGTCG CTCCGCTGCT CTGCGCGGGT
ATCACGGCCT ATTCCGCCTT AACCCATGGC CCTGTTGGGC CAGGCGATCA GGTGGCCATC
CTGGGCCTGG GGGGCATCGG TCATTTGGCC GTCAAGTTTG CCGTGGCTTT TGGGGCTCAG
GTCACTGTGC TGAGTAGCTC ACCCCAGAAA CAGGAACCTG CACTGGCGCT GGGCGCTCAT
GCGTTTATCC ATACGGGAGA TAAAACAGCG ATGAAGCAGG CCAACCGCCG GTTCGATTTT
ATCCTCGACA CGGTATCGGC CAATCATGCG TACGATCCGT ACCTAAACCT GCTCAAAAAA
GACGGTACGC TGATCGTCGT CGGCCGACCG CCCCAAACAC CCCAGCTAGA CCCGATTTCG
CTTATTTCCC GAAGACGAAA GATCGTTGGC TCCTTCATTG GGGGGATGGC CGAAACCCAG
GAAATGCTCG ACTATTGCGC GGACCATGCC ATCACGGCTG ACATTGAACT CATTCCCCCC
GTTGACATGA ATAAGGCTTA TGAGCGTGTA TTGAACGGGG ATGTACACTA TCGTTTTGTC
ATCGATATGG CCCAATTAAC CCAATGA
|
|---|
| Protein sequence | MIQARGYAAL GSSQALRPYA FERKEVDARQ VLIRILYCGI CHADIHQARN EYGNTHYPLV
PGHEIVGRIE RVGPLVTQFN AGDLVGVGYF IDSCRHCSSC AEGEEQFCET GLLPTQNGKL
PDGSTTKGGY SDVIVVDERY VLHISERLDA PAVAPLLCAG ITAYSALTHG PVGPGDQVAI
LGLGGIGHLA VKFAVAFGAQ VTVLSSSPQK QEPALALGAH AFIHTGDKTA MKQANRRFDF
ILDTVSANHA YDPYLNLLKK DGTLIVVGRP PQTPQLDPIS LISRRRKIVG SFIGGMAETQ
EMLDYCADHA ITADIELIPP VDMNKAYERV LNGDVHYRFV IDMAQLTQ
|
|---|
| |