| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3719 |
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| Symbol | |
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| ID | 8727472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4484775 |
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| End bp | 4486109 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003388519 |
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| Protein GI | 284038589 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.633766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0948534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACT GTCAACTCCT TATTTGGTTA GTGGGCATAA GTAGTAGCGT AACCGTTCAG
GCACAGCCCC TTTCATTTGC CGACTGTATA GACTTTAGTT TAAAGAATCA CCCATCAACG
GTAGTGTATA CCAACAACGT TGGCATGGCG AACGAACGGG CTAAACAAGC TCTATCGGTG
TATCTGCCTC AGATTAATGG CTCTGTAACC TATGTCGATA ATCTGCAGCT ACCTACTACC
ATTTTGCCCG CCGGTATTTT CGGTCCTGAC GCGAAAGAAG TAAAATTTGG CAACCAATTC
ACGGCCAATG CTTATCTGGA TGCCAGCCAA CTCCTCTACG ATCAGTCGCG TATTTACGGC
ATCCGTGCCA GCGAACCTTA CCAGCAACTC ACTGAATTGC AAAAAGAACA GAACAGGGAA
ACAATTATTT ACAACACCGC TGTCGCGTTT TTTCAGGTGC TGATTTATCG GGAACAGGAA
AAAATTTTAC AGAATAACCT TCGGAATTAT ACCAGCATGC TGTCGCCGAT GATGCTTCAG
GTGCAAAAAG GAGTGGTGTT GCAGAAAGAT GTTGATCGCG TAACGGTCAG CCGAAACACC
ACAGCGTATC AGATCAACGA TGCGCAATCG AAGGAAGTAC TGGCCTTAAA TACGCTCAAA
AATGCGATGG GGCTTCCGCT AACGGCTCCG CTCAGTATAA CCGATAGCCT TACCTATGAA
ACCTTTGCTA TACTGCCTTC ATCGGCTGAA TTTACGGCAT CCGGTACGTA TGATTACCGC
ATCGGGCAAA CGAATCTGAC CTTGCAGGAA ATTGATCTTC AGACTAAAAA GGCTGCTTTT
TTGCCAACGG TAGCTGCCAT TGGCCGATAT GGACAGCAGG CCTACAGCAA TGATTTTAGT
ACATCGCTTA AGAATTGGTA CGGGTATTCT TACATCGGAC TGGCCGTGAA CGTGCCCATT
ATGAGCGGCT TACGGCGTAA GAGCCAGCTA GAAGAAAGCA AGCTAAATCT GGAAAATACG
AAAATCAATC TCGAACTGAG CCGACAAAGT CTGCTGCTCC GCTTCGAGAA CGCACGAGCC
GCTCTGATTT CGGCATTTAC AGGGCTGCAA AGCAATAAAG AAACCCTCCG ATTGGCACAA
CAGGTAGCCG CAGTAACCAC CACTCAATAT CAGAAAGGGG TAGGGTCAAT AATTGATTTT
CTGAACGACG ACAATGCCGT TCGTAATGCG CAGGAAACCT ATCTCAGCAG TCTGCTGAAT
GTACTGCTGG CCCGGCTTAA CTACGAAAAA GCACAGGGGA CACTTACTAC CTATTACACA
CAACTCAAAA ACTAA
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| Protein sequence | MKDCQLLIWL VGISSSVTVQ AQPLSFADCI DFSLKNHPST VVYTNNVGMA NERAKQALSV
YLPQINGSVT YVDNLQLPTT ILPAGIFGPD AKEVKFGNQF TANAYLDASQ LLYDQSRIYG
IRASEPYQQL TELQKEQNRE TIIYNTAVAF FQVLIYREQE KILQNNLRNY TSMLSPMMLQ
VQKGVVLQKD VDRVTVSRNT TAYQINDAQS KEVLALNTLK NAMGLPLTAP LSITDSLTYE
TFAILPSSAE FTASGTYDYR IGQTNLTLQE IDLQTKKAAF LPTVAAIGRY GQQAYSNDFS
TSLKNWYGYS YIGLAVNVPI MSGLRRKSQL EESKLNLENT KINLELSRQS LLLRFENARA
ALISAFTGLQ SNKETLRLAQ QVAAVTTTQY QKGVGSIIDF LNDDNAVRNA QETYLSSLLN
VLLARLNYEK AQGTLTTYYT QLKN
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