| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3687 |
|---|
| Symbol | |
|---|
| ID | 8727440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4445032 |
|---|
| End bp | 4446273 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | glucose/galactose transporter |
|---|
| Protein accession | YP_003388491 |
|---|
| Protein GI | 284038561 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.202302 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.04252 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTCCT CCTCCCCTAA AGTTCAGAGT TACATGGGCC CACTGCTCAT CATTGCGGTC
CTGTTTTCGG TCTTCGGTTT TCTCACTTGG GTCAATAGTG TGCTGATTGC ATTCTTCAAA
CAGGTCTTTG ATCTAAGTAC CGTCGCTTCA AACTTAGTAG CCTTTGCTTT TCTGATCTCC
TATACCGTTA TGGCTATTCC AGCCTCTATG TTCTTAAACC GGACGGGCTT TAAAAACGGG
ATGTCACTCG GCCTCTTAGT GATGGCGACC GGAACATTGG TTTTCGTTCC AGCCGTCCGG
ATGGTATCCT ATCCACTGTT TCTAGTGGGT TTATTCGTGA CGGGCATTGG TATGACAGTG
CTCCAAACGG CAGCCAATCC TTACGCCACT ATTTTGGGGC CGCGCGAGAG TGCAGCACAA
CGGATAAGTT TCTTGGGTAT CGCCAACAAG CTAGCCGGTA TTGCTAGTCA GTATATCTTT
GGCGGACTAC TGCTAACCGG AGCCAATACG GTAGCTAGTG CGGCTTCGCT GGAAAAAATT
ATAGCACCCT ATCTGATCTT GACCGCACTT CTAGTCGTCT TAGCGGGTTT AATCCGCTTT
TCCAGCTTAC CCGAATTATC AGAAGAACAA GATAATCCCT CATCGAGTCC AGCGGCTGCT
TCCCAACCGG TTAGCGCAGT CCAAACCCGT ATATGGCAAT TCCCTAATTT GATCCTAGGG
GTAGTCACCC TGTTCTGTTA TGTGGGGGCG GAGGTGATTG CCGGTGACAC GATCATCAAC
TATGGCCGAG CATTAGGCTT CAACAATGAT GAAGCCAAGT ATTTTACCAC CTATACGCTG
TATGGATTAC TAGCGGGCTA TTTACTAGGA ATTGTTTTAA TTCCTCGTTT TATCTCCCAA
CAAACGGCCT TACGCTTTGG GGCTATTTAT AGTCTGTTGC TGACGGTGGC CACTTTACTG
AGCAGCGGCT TTACGTCCGT ATTATGCGTA GCCTTGCTGG GCTTTGGCTT AGCTCCTATT
TGGCCTGCCA TCTGGCCCTT GGCTTTGAAT GGGTTGGGGC GTTTTACGAA GACCGGCTCT
GCCCTGTTGA TTATGGGAAT TTCTGGAGGA GCCTTATTAC CCTTGTTACA CGGTTATATC
ACCGATACGG TCAGTCCTAA AATGGCTTAT GCTTTGTTGC TCCCCCTCTT CAGTTTCATC
TTATACTATG CAATTTGGGG CCATAAAAAG ACAAGTTGGT GA
|
|---|
| Protein sequence | MVSSSPKVQS YMGPLLIIAV LFSVFGFLTW VNSVLIAFFK QVFDLSTVAS NLVAFAFLIS
YTVMAIPASM FLNRTGFKNG MSLGLLVMAT GTLVFVPAVR MVSYPLFLVG LFVTGIGMTV
LQTAANPYAT ILGPRESAAQ RISFLGIANK LAGIASQYIF GGLLLTGANT VASAASLEKI
IAPYLILTAL LVVLAGLIRF SSLPELSEEQ DNPSSSPAAA SQPVSAVQTR IWQFPNLILG
VVTLFCYVGA EVIAGDTIIN YGRALGFNND EAKYFTTYTL YGLLAGYLLG IVLIPRFISQ
QTALRFGAIY SLLLTVATLL SSGFTSVLCV ALLGFGLAPI WPAIWPLALN GLGRFTKTGS
ALLIMGISGG ALLPLLHGYI TDTVSPKMAY ALLLPLFSFI LYYAIWGHKK TSW
|
|---|
| |