Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3636 |
Symbol | |
ID | 8727389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4393695 |
End bp | 4394930 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003388442 |
Protein GI | 284038512 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.138317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.90769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACAC TTTCTCCCAA CTCATCCTCC CTGCGCCCTT TGTTTGCCCT ACCGGTTATT GTGGCTGCAC TGGGCTATTT CGTGGATGTA TACGACCTGC TGTTGTTCAA CATTGTGCGG GTACCCAGCC TGAAAGAATT GGGGCTTTCT GAGGCAGACA TCTCACTCAT TGGCGGTAAA ATCCTGAATT ATCAGCAGGC CGGTTTGCTT CTCGGCGGAA TTCTATGGGG GATTTTGGGC GACAAACGGG GCCGACTTTC GGTTTTGTTT GGGAGCATCA TTACGTATTC GCTGGCGAAT CTGGCCTGCG GGTTTGTTCA TGACCCACAG TTGTACGCGT GGCTTCGGTT TATTGCCGGT CTCGGGCTGG CCGGTGAACT GGGGGCGGGT ATTACGCTGG TGAGCGAGAT TTTACCCCCT AACCTGCGCG GATATGGCTC CTCGCTGGTG GCGAGCGTGG GGTTACTGGG TGCCGTTGTC GCGTACTTTA CCGTCACGCT TTTTGACTGG CGCACGACGT ATTTTATTGG CGGTGGGCTG GGCCTGGGGC TGCTGGTGCT CCGGGTTAGT GTACTCGAAT CGGGCATGTT CAAACGCGTG CAGGGTACGA GCGTGAGCCG GGGGAACTTT CTGGCGTTGT TCAACAGAAA ATCGAAGGTG TTGAGGTATC TCCGGTGTAT GGGCATTGCT CTCCCGACTT ATCTGGTCAT TGGTATCCTG GCCACGTTTG GAAATGAGTT CGGGAAAGCG ATTGGCCTCG CGGAGCCTGT TCAGCCCGGC CGATGCGTGA TGTTTACCTA CGTGGGTACC GTTCTGGGCG ATTTGGCGAG TGGTATTCTC AGCCAGTATC TTCAATCCCG GCGCAAAGCC GTTGGTCTGA TGATGAGCCT GACGTTCGTT TTCGTCATCA TATATCTCTT TGGTGGTATC AACTCGACCG GGGCTTTTTA TGGCCTTTGC CTGGCTATGG GCTTCGGTAT CGGCTACATC GCCATGTTCC TGACTATTAC GGCGGAGAGT TTCGGTACCA ACCTGCGGGC TACGGCCACC ACATCGGTAG CCAATAACGT TCGGGCCACA ACGCTGATCA GCATTCCCGC CTTTCAGGCC ATGAAACCTT CGCTGGGAGT TTTGGAAGCT GCGGCCATTG TCGCTTTTGT TTGCTTCGCC CTCGGCTACT GGTCGCTGGC AACGATGGAA GAAACGTATG GCAAGGAGCT GGATTACACG GAGTAG
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Protein sequence | MQTLSPNSSS LRPLFALPVI VAALGYFVDV YDLLLFNIVR VPSLKELGLS EADISLIGGK ILNYQQAGLL LGGILWGILG DKRGRLSVLF GSIITYSLAN LACGFVHDPQ LYAWLRFIAG LGLAGELGAG ITLVSEILPP NLRGYGSSLV ASVGLLGAVV AYFTVTLFDW RTTYFIGGGL GLGLLVLRVS VLESGMFKRV QGTSVSRGNF LALFNRKSKV LRYLRCMGIA LPTYLVIGIL ATFGNEFGKA IGLAEPVQPG RCVMFTYVGT VLGDLASGIL SQYLQSRRKA VGLMMSLTFV FVIIYLFGGI NSTGAFYGLC LAMGFGIGYI AMFLTITAES FGTNLRATAT TSVANNVRAT TLISIPAFQA MKPSLGVLEA AAIVAFVCFA LGYWSLATME ETYGKELDYT E
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