Gene Slin_3414 details

Gene Information

• Locus tag: Slin_3414
• ID: 8727167
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: -
• Start bp: 4132126
• End bp: 4135509
• Gene Length: 3384 bp
• Protein Length: 1127 aa
• Translation table: 11
• GC content: 48%
• Product: helicase domain protein
• Protein accession: YP_003388221
• Protein GI: 284038291

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGATGTTA GAGTTATTTT GCCCTACTTT ATTGATCTAA ACAATAAAGT GCCGACTAAT 
AGTACTGATC GAATGCAAAC CAAATTCTTC ACCAACGACG ATAGCAACTC GCTGCTTGCT 
AAAATTGAAG GTATTTTTAA ACATCGTAAT ATCCATTTTT TTGATGCGCT AGTCGGTTAT 
TTCTATGCGT CAGGCTATTT CCGGATTCGG CCCTATATAG AACGGGCAGC AGAAGTACGG 
GTTTTGGTTG GTATCAATGT CGATAAAATG GTTTTTGAAG CATCGAAGCA GGGTGTCTTG 
TTCTCAGCCG ATGCGTATAA GTCGCAGGAA GATTTTTTTG AGTCGGCTAA AAAGAATATT 
CAGCAGGCTA AATATAGCAA GGCCGTTGAG GATGGTATGC TCGGTATGAT CGACGACATC 
GTTTCGGGTA AGCTCCAAAT CCGCGTTCAT CCCAAACAGA ATATCCACGC TAAAGTCTAC 
GTTTTTCGCG AGCAGGTTCG GCACGATCAC GGCTACGGCT CTGTGATCAC TGGCTCCAGC 
AACCTGACTG AACCGGGGTT AGAACGCAAT TTCGAATTCA ATGTCGAGTT GCGGGAAAAC 
GGCGATATCG ATTTCGCCAC CGAAACGTTT GAGCGTCTTT GGAGTGAGTC GGTGCCGGTT 
AGTGAAGAGT TCATTACCCG GCTTAAAAGC GAAACCTTTC TCAATGATCA GTTTACGCCT 
TATGAGGTCT ATCTAAAATT TCTGATCGAG TATTTCGGTA AAAGCATCGA CTACGATCCT 
AACTCGGAAA CCGATCTGCC CAAAGGGTTT TTACCGCTTG TTTACCAGCG CGATGCGGTC 
AATGATGGAT ACAATAAGAT GGAAAAGCAT GGTGGGTTCT TTCTATCGGA TGTGGTAGGG 
TTAGGCAAAA CCATCATTGC TACGCGCATT GCCAAGAAGT TCTACTTCAA AAACGGATTT 
CCTGAACACC GCTCCCGAAC GTTGATTGTG GTGCCACCTG CCTTGAAAGT CAACTGGGAA 
GAAACCATCG AGAAATTTAG TCTCGATGGG GTACATATCA TCACCAACGG TAGCCTGCAC 
AAGGTGCGTA ATCCGAATCA GTATGATCTG ATTATTGTAG ACGAAGCCCA TAAGTTTCGA 
TCCGATACGG CCGAAGCTTA TAACGACTTA CAAAAAATCT GTAAAACACC TACGCGACGC 
CGTCGGCAGG ATGGTACGGC TTACCCTAAA CGCGTGATGC TGGTGTCGGC AACGCCCCTC 
AATAACTACC CTCAGGATAT TGCTAATCTG GTTTACCTCT TTCAGGATAG TAAAGATTCG 
ACGCTCGAAA TTGGCAATCT GCAACATTTT TTTCGCCAGC ATATCGATGC CTATCGCAGG 
TTGAAACAGG AACCCGATAT GCAAAAGGTG AATGCGGGGG TTCGCCAGAT TTATGAACAG 
ATTCGGGTGA AGGTGATTGA GCCGCTGACC GTTCGGCGAA CCCGGACCGA CCTGAAGCTT 
CATCACCAGT ACCGGGATGA TCTGACGGCT CAGAAGATTG AGTTTCCCGA TGTGCGTAAG 
CCCGAAAAAA TACTGTACCA ACTGGCTCCC CATCTGGAAG CGCTGTATGA TCAAACCATC 
CGCCATTTAA CGCACCCTAC CGAAGGCTTG ACCTATAACC GGTATCGGGC CATTGGAGCG 
CTAAAACCGC ATAAAAAGCA GAAGTATAAA AAGGCCGACA TGATTTCGAC CCAGTTGGCC 
AAGATCATGA AGACGATGCT CGTTAAGCGG ATCGACAGCA GTTTTTTCGC TTTCCGGCAG 
TCGATCCGGC GGTTCTGCGA AGCCAACGAA GCTATGGTGA AAATGTTCGA TACGGGCCGG 
GTGTTTATTG CGCCTAATCT ACCCGTTTCG GATATGATCA ATGATGGGCG GGAAGACGAA 
CTGTTCGACC TGGTTACGAC CTTAATGGAT CTTGATCCGA CCATTGATAT TTGTGTTCCA 
GACGACTTCG AGCCTGGGTT TTATGAGGGA CTGATCCGCG ACCAGCAGGT ATTGAATGCC 
TTATCGAAAA CCTGGGATGA CCTCGGCGAC GAAGACCCGA AGTTGGATAC GTTTGTCGAG 
TATATTCAGA AAACGCTGTT CGGTCCTGAA AACCGTGAAA AGAAGCTGGT TGTATTCTCA 
GAAAGCAAAG AGACGACGGA ATACGTAGCC CGCCGACTAC GTGAAGCCAT TGATCGGCTT 
GGCCTCGCGC ATCGGATTTT GACGGTTGAC AGTCATACCC GCAAAGATCG GATGCCGCTT 
ATTCGTGCCA ATTTCGATGC CAACCTGCCA GCCGAGCAGC AAGTGGCGGG TGAATCGCCG 
GAACATTACG ACATCATTAT CTCTACCGAA GTGCTGGCCG AGGGGGTTAA CCTGCACCGC 
GCCAATGTTA TCGTGAACTA CGATACGCCC TGGAATGCAA CGCGCCTGAT GCAGCGCATT 
GGCCGTGTAA ACCGCATTGG TACAAAGGCA AAGGCGGTCT ACATCTACAA CTTTTTTCCG 
ACGGCTCAAG TGGACAACGA CATCGACTTA CAGAAAAAGG CGATGATGAA ACTCCAGGCT 
TTTCATGCCG CTCTGGGTGA AGACAGCCAG ATTTATTCGC CCGATGAGGT GATTGAGTCC 
TTCGGTCTTT TTGACAAAGA TGTGGATGAG GAACGCGATG AGAAACTGGA TTACCTGATG 
CAAATCCGCG ATTTGAAAGA AAAAGACCCG GATTTGTTCA AACGGATTAA AACCATGCCA 
TTACGGGCTA GGGTAGGCCG TAAAGACCGG ATGCAGCACC AGGCCACCAT CACCTTTATT 
CGGGACCAGA AACGGGATGC ATTCCTGTAC ATCCGTGCCG GTCTGGATGG CGCTGGCAGT 
ATGGCGGAGG AGCTTACCTT TCTGGAAACG GCCAAACGAT TTCAGTGCAT GGTTCATGAG 
CGGGCCGTTA AGCTTCACGA CCTTCACCAC GAACAGGTGC AAATGGGTGT AGATCGGTTT 
CAGGCGCAGG TAGAAGCCGA GAAAGCGCAG GATAAAAAAG TAGATGTTAC GCAGGGGCCG 
AATGAAAAGA AAGCCCTGAT GTTTCTGGAT GCGTTTTTGA CGTTGCCGTT TATCAGCGAA 
GACGAAAAAA CGTTGGTTGG TCTGGCGAAA GATGCTATCC GGCGGGGGCG GTTCCAAAAC 
CTGCAACGCG ACATTAATAA ACTTCAGAAG TCGCAAACGA AAGAGAAGAG GCAAGCCGCT 
ATTTTGCTTG AAAGCCTGAT GAAAATCCTG CATAGTTATC CGTTAAGCCA GCCCGATGAG 
GATGTGTCTG TCACACCTGT TGTGCCGGTC GTTGTTGCGC CTACAGAACC AGCGATTATT 
ATTTCGGAGA GTTTCAGCGC GTAA 

 

Protein sequence

MDVRVILPYF IDLNNKVPTN STDRMQTKFF TNDDSNSLLA KIEGIFKHRN IHFFDALVGY 
FYASGYFRIR PYIERAAEVR VLVGINVDKM VFEASKQGVL FSADAYKSQE DFFESAKKNI 
QQAKYSKAVE DGMLGMIDDI VSGKLQIRVH PKQNIHAKVY VFREQVRHDH GYGSVITGSS 
NLTEPGLERN FEFNVELREN GDIDFATETF ERLWSESVPV SEEFITRLKS ETFLNDQFTP 
YEVYLKFLIE YFGKSIDYDP NSETDLPKGF LPLVYQRDAV NDGYNKMEKH GGFFLSDVVG 
LGKTIIATRI AKKFYFKNGF PEHRSRTLIV VPPALKVNWE ETIEKFSLDG VHIITNGSLH 
KVRNPNQYDL IIVDEAHKFR SDTAEAYNDL QKICKTPTRR RRQDGTAYPK RVMLVSATPL 
NNYPQDIANL VYLFQDSKDS TLEIGNLQHF FRQHIDAYRR LKQEPDMQKV NAGVRQIYEQ 
IRVKVIEPLT VRRTRTDLKL HHQYRDDLTA QKIEFPDVRK PEKILYQLAP HLEALYDQTI 
RHLTHPTEGL TYNRYRAIGA LKPHKKQKYK KADMISTQLA KIMKTMLVKR IDSSFFAFRQ 
SIRRFCEANE AMVKMFDTGR VFIAPNLPVS DMINDGREDE LFDLVTTLMD LDPTIDICVP 
DDFEPGFYEG LIRDQQVLNA LSKTWDDLGD EDPKLDTFVE YIQKTLFGPE NREKKLVVFS 
ESKETTEYVA RRLREAIDRL GLAHRILTVD SHTRKDRMPL IRANFDANLP AEQQVAGESP 
EHYDIIISTE VLAEGVNLHR ANVIVNYDTP WNATRLMQRI GRVNRIGTKA KAVYIYNFFP 
TAQVDNDIDL QKKAMMKLQA FHAALGEDSQ IYSPDEVIES FGLFDKDVDE ERDEKLDYLM 
QIRDLKEKDP DLFKRIKTMP LRARVGRKDR MQHQATITFI RDQKRDAFLY IRAGLDGAGS 
MAEELTFLET AKRFQCMVHE RAVKLHDLHH EQVQMGVDRF QAQVEAEKAQ DKKVDVTQGP 
NEKKALMFLD AFLTLPFISE DEKTLVGLAK DAIRRGRFQN LQRDINKLQK SQTKEKRQAA 
ILLESLMKIL HSYPLSQPDE DVSVTPVVPV VVAPTEPAII ISESFSA