| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3356 |
|---|
| Symbol | |
|---|
| ID | 8727109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4059556 |
|---|
| End bp | 4060677 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | Chitinase |
|---|
| Protein accession | YP_003388165 |
|---|
| Protein GI | 284038235 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.934755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.141475 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGAC CGGTATACAC CTTCCTACTA GTCTCATTCA CCCTACTGCT TTTGGTGGCG
TTCAAACCCA AACCCACCGC CAAACCAATT GTGCTGGCTT ATGTGGGCGG ATTTCGCGGA
CTGGTGGACA CCGAAAAAAT TGCCGCCGAA AAAATCACGC ATATCAACTA CGCCTTTGTC
GATGTTCGAA AAAACCGGGC GTGGCTCCAC AACCTCGCTA CCGACTCCAC CAATTTCAGA
AAACTCAACC TGCTCAAACG ACGTAATCCT GACCTTAAAA TCCTGATTTC CCTTGGCGGC
TGGTCCTGGA GCGAGAACTT CTCCGACGCA GTCGTGAGCG ATACCGGTCG AGTCGCATTT
GCTGCGTCAG CCGTTGATAT TATCCGGGAA TACCAGCTGG ACGGTATCGA CATCGACTGG
GAATACCCTG GTATGAAAGG CGAAGACAAC GTGTTCCGGT CCGAAGACAA AGAAAACTTC
ACCCTGCTTT TCAAATCCCT GCGCGAACAG TTGAACAGTC TGAAAAAGCA AACGGGCAAA
GACTATCTCG TTACGACAGC TCTACCCGGC TTCGAGGCCA TTTTTACGCA TACTGATATG
GCTCAGGCCC AGCAATATCT GGATTACATT AACGTGATGT CGTACGATTT CTTTACGGGA
GGGCCACAGG CCGGGCATCA TACGAACCTG TACGCATCCG GTAAAGTCGA CAAGGAAAGT
TCCGGCGATC TATCCGTGAA ACGGTACGAA CAGGCGGGGG TTCCGGCCAA TAAGCTTTTG
CTGGGCATTG CCTTCTATGG CCGGGCGTGG CAGTTACAGG ACGGAAACCC AAAGACCCAT
CCAAGAACCA TTACTAAAGT GGAGCGGGGC GGTGGCTACA CCTTCATTAA AGACAGCCTG
CTCACCAACC CGGCCTACAA ACGCCACTGG GACCGACGCG CCAAAGCCCC TTACCTATAC
AATGCCGACC TGAAACGGTT TGTCTCCTAC GATGACGAGA AATCCGTAAA AGCCAAGTGC
GATTACGTGA AGAAAAACGG CCTGGCGGGT GTGATGTTCT GGGAATACTT CAGCGACCCC
AAAGGGTATC TGCTAAACGA AATTGACCGC CAGTTTTTGT AA
|
|---|
| Protein sequence | MIRPVYTFLL VSFTLLLLVA FKPKPTAKPI VLAYVGGFRG LVDTEKIAAE KITHINYAFV
DVRKNRAWLH NLATDSTNFR KLNLLKRRNP DLKILISLGG WSWSENFSDA VVSDTGRVAF
AASAVDIIRE YQLDGIDIDW EYPGMKGEDN VFRSEDKENF TLLFKSLREQ LNSLKKQTGK
DYLVTTALPG FEAIFTHTDM AQAQQYLDYI NVMSYDFFTG GPQAGHHTNL YASGKVDKES
SGDLSVKRYE QAGVPANKLL LGIAFYGRAW QLQDGNPKTH PRTITKVERG GGYTFIKDSL
LTNPAYKRHW DRRAKAPYLY NADLKRFVSY DDEKSVKAKC DYVKKNGLAG VMFWEYFSDP
KGYLLNEIDR QFL
|
|---|
| |