Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3202 |
Symbol | |
ID | 8726955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3878728 |
End bp | 3880692 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Peptidoglycan glycosyltransferase |
Protein accession | YP_003388012 |
Protein GI | 284038082 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000159747 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0376991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGAGA ATCGAAAGTG GGTCATCATT GGTATTTTTT GCCTGGTTGG ATTAACGTAT CTGGCCCGAT TGTTTTATCT ACAGGTGCTG GACGACACCT ATTCGCTGGG GGCATCGAAG AACTCCATTA AACGAGTGGT CGAAATACCC TATCGCGGGC AGATTTATGA CCGAAACAAC CAGCTTATCG TTTATAATAC CCCTGTTTAC GATCTGTACG TGACGCCCAA GCAGGTTCGG ATTCCGGATA CATCGGCTTT CTGCCGGATG ATGAACATCA GTGTTTCGGA CTTTGACAGC ATCATGGGGC TGGCGAAAAA CTATTCGCCG GTGAAGCCCT CCCTGTTTCT GCGGCAGCTT TCCAAAGAGG ATTTTGCCCG GATTCAGGAT GCGCTGGTCG ATTATCGGGG TTTTGAACCG GTCATCAGCT CCATGCGCAC CTATCCGGCA CATACATTGT CGAATGCATT GGGCTATGTA AGTGAAATCA GCAAGAAGCA GCTTGACAGC CAGGATATTC TTTATTACCG ACAGGGAGAT TACATTGGCC ATAACGGACT GGAGGAACAG TACGAAGAGC AGTTGCGGGG CAGGCGGGGC GTTAAATTCA TGATGCAGAA TGTTCATGGC GTGAACAAAG GCTCCTGGAA GAATGGAGCC TACGATACGC TGGCCGTTGC CGGACAAAAT CTGATCACTG GTATTGATGT TGACGTGCAG AAGTACGCCG ATAGCCTGAT GCAGAATAAG GTAGGCGCGG TGTTGGCCGT TGAACCCGCA ACCGGCGAAA TTCTGGTATC GGTTTCCGCG CCAACCTATG ACCCCAATCT GTTATCGAGT CGTTTCTTTT CGAAGAACTA CCGGGCATTA CTCCGAAACC CTTACAAGCC GCTCATCAAC CGACCGGTGA TGTCGAGCTA TCGTCCCGGC TCAACATTCA AGTTAATTCA GGCGCTAATT GCTCAGCAGC AGGGGTCTCT TCTTCCAACT ACCGTTTATG GGCATGCGGG TTCGCCTATG CGCTGCCACT GCCGGGGTGG AAATAACCTG CGTGGTGCCG TTCAAAACTC CTGCAACCCA TATTTCTATT ATGTGTTTCG CAAGTTTCTC TATTTCAATG GAGAGCACAA CACCTTTAAG GCGTCGGCCA TTGGTCTCAA ACAATGGCAT GACATGGCAG AGAAATTTGG GATTGGCAGT AAGCTTGGCG TCGATCTGCC ATCGGAAAAG AAAGGGAATC TGCCAACACC CGAGTATTAC GATAAAGCAT ACGGCGGAAC ATTGCGCTGG AAGTTTTCAA ATGTTTATTC GCTCAGCATT GGCGAAGGAG AATTGTTGAT CAGCCCGCTG AAGCTGGTCA ATTTGGCGGC TACCATCGCC AATCGGGGTT GGTTTATTAC TCCGCATTAC ATCAAAGGCT TCGGTAAGGC GGGCGCTGGT CTCCCTGCCG AATACCTCGA ACGGCACGAA ACGGGCATAG ACTACAAGTA TTATCTGCCG GTCATTGACG GTATGCGGGG GGCTGTCGCC CATGGTACCG TAACGCCCCT GGCAAACATC GCGGGAATCG ATCTGTGTGG TAAGACGGGG ACATCGCAGA ACAATAAATT CGGGCATAAA TTCGACCACT CCATCTTCAT CGGGTTTGCG CCCATGAACA ACCCTAAAAT TGCGGTGGCG GTGTTTGTGG AGAATGCAGG CTGGGGCGGT AAGGCAGCCG CTTCGGTAGC CGCTCTGGTA GCCGAACGCT ACCTGAAGCG GAAGACAGAA GCCAAAAAAC TCGAAGAGCA GGTTATGGCA TCCAACTATA TGCCACCCAT CAGTGGACTG CCCGTGTCTA AAAAACCAGC ACCCGTATCC CCGAAAAAGG ATACTACCCA ACACAAGCCA GCTCCAGTGC CTAAACCCCT GATGACCGAC ACAAAAGCGA AGCCGGTCGT AGCTGCTGTT CTACGCGGAA ACTAA
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Protein sequence | MLENRKWVII GIFCLVGLTY LARLFYLQVL DDTYSLGASK NSIKRVVEIP YRGQIYDRNN QLIVYNTPVY DLYVTPKQVR IPDTSAFCRM MNISVSDFDS IMGLAKNYSP VKPSLFLRQL SKEDFARIQD ALVDYRGFEP VISSMRTYPA HTLSNALGYV SEISKKQLDS QDILYYRQGD YIGHNGLEEQ YEEQLRGRRG VKFMMQNVHG VNKGSWKNGA YDTLAVAGQN LITGIDVDVQ KYADSLMQNK VGAVLAVEPA TGEILVSVSA PTYDPNLLSS RFFSKNYRAL LRNPYKPLIN RPVMSSYRPG STFKLIQALI AQQQGSLLPT TVYGHAGSPM RCHCRGGNNL RGAVQNSCNP YFYYVFRKFL YFNGEHNTFK ASAIGLKQWH DMAEKFGIGS KLGVDLPSEK KGNLPTPEYY DKAYGGTLRW KFSNVYSLSI GEGELLISPL KLVNLAATIA NRGWFITPHY IKGFGKAGAG LPAEYLERHE TGIDYKYYLP VIDGMRGAVA HGTVTPLANI AGIDLCGKTG TSQNNKFGHK FDHSIFIGFA PMNNPKIAVA VFVENAGWGG KAAASVAALV AERYLKRKTE AKKLEEQVMA SNYMPPISGL PVSKKPAPVS PKKDTTQHKP APVPKPLMTD TKAKPVVAAV LRGN
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