Gene Slin_3202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3202 
Symbol 
ID8726955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3878728 
End bp3880692 
Gene Length1965 bp 
Protein Length654 aa 
Translation table11 
GC content51% 
IMG OID 
ProductPeptidoglycan glycosyltransferase 
Protein accessionYP_003388012 
Protein GI284038082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000159747 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0376991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGAGA ATCGAAAGTG GGTCATCATT GGTATTTTTT GCCTGGTTGG ATTAACGTAT 
CTGGCCCGAT TGTTTTATCT ACAGGTGCTG GACGACACCT ATTCGCTGGG GGCATCGAAG
AACTCCATTA AACGAGTGGT CGAAATACCC TATCGCGGGC AGATTTATGA CCGAAACAAC
CAGCTTATCG TTTATAATAC CCCTGTTTAC GATCTGTACG TGACGCCCAA GCAGGTTCGG
ATTCCGGATA CATCGGCTTT CTGCCGGATG ATGAACATCA GTGTTTCGGA CTTTGACAGC
ATCATGGGGC TGGCGAAAAA CTATTCGCCG GTGAAGCCCT CCCTGTTTCT GCGGCAGCTT
TCCAAAGAGG ATTTTGCCCG GATTCAGGAT GCGCTGGTCG ATTATCGGGG TTTTGAACCG
GTCATCAGCT CCATGCGCAC CTATCCGGCA CATACATTGT CGAATGCATT GGGCTATGTA
AGTGAAATCA GCAAGAAGCA GCTTGACAGC CAGGATATTC TTTATTACCG ACAGGGAGAT
TACATTGGCC ATAACGGACT GGAGGAACAG TACGAAGAGC AGTTGCGGGG CAGGCGGGGC
GTTAAATTCA TGATGCAGAA TGTTCATGGC GTGAACAAAG GCTCCTGGAA GAATGGAGCC
TACGATACGC TGGCCGTTGC CGGACAAAAT CTGATCACTG GTATTGATGT TGACGTGCAG
AAGTACGCCG ATAGCCTGAT GCAGAATAAG GTAGGCGCGG TGTTGGCCGT TGAACCCGCA
ACCGGCGAAA TTCTGGTATC GGTTTCCGCG CCAACCTATG ACCCCAATCT GTTATCGAGT
CGTTTCTTTT CGAAGAACTA CCGGGCATTA CTCCGAAACC CTTACAAGCC GCTCATCAAC
CGACCGGTGA TGTCGAGCTA TCGTCCCGGC TCAACATTCA AGTTAATTCA GGCGCTAATT
GCTCAGCAGC AGGGGTCTCT TCTTCCAACT ACCGTTTATG GGCATGCGGG TTCGCCTATG
CGCTGCCACT GCCGGGGTGG AAATAACCTG CGTGGTGCCG TTCAAAACTC CTGCAACCCA
TATTTCTATT ATGTGTTTCG CAAGTTTCTC TATTTCAATG GAGAGCACAA CACCTTTAAG
GCGTCGGCCA TTGGTCTCAA ACAATGGCAT GACATGGCAG AGAAATTTGG GATTGGCAGT
AAGCTTGGCG TCGATCTGCC ATCGGAAAAG AAAGGGAATC TGCCAACACC CGAGTATTAC
GATAAAGCAT ACGGCGGAAC ATTGCGCTGG AAGTTTTCAA ATGTTTATTC GCTCAGCATT
GGCGAAGGAG AATTGTTGAT CAGCCCGCTG AAGCTGGTCA ATTTGGCGGC TACCATCGCC
AATCGGGGTT GGTTTATTAC TCCGCATTAC ATCAAAGGCT TCGGTAAGGC GGGCGCTGGT
CTCCCTGCCG AATACCTCGA ACGGCACGAA ACGGGCATAG ACTACAAGTA TTATCTGCCG
GTCATTGACG GTATGCGGGG GGCTGTCGCC CATGGTACCG TAACGCCCCT GGCAAACATC
GCGGGAATCG ATCTGTGTGG TAAGACGGGG ACATCGCAGA ACAATAAATT CGGGCATAAA
TTCGACCACT CCATCTTCAT CGGGTTTGCG CCCATGAACA ACCCTAAAAT TGCGGTGGCG
GTGTTTGTGG AGAATGCAGG CTGGGGCGGT AAGGCAGCCG CTTCGGTAGC CGCTCTGGTA
GCCGAACGCT ACCTGAAGCG GAAGACAGAA GCCAAAAAAC TCGAAGAGCA GGTTATGGCA
TCCAACTATA TGCCACCCAT CAGTGGACTG CCCGTGTCTA AAAAACCAGC ACCCGTATCC
CCGAAAAAGG ATACTACCCA ACACAAGCCA GCTCCAGTGC CTAAACCCCT GATGACCGAC
ACAAAAGCGA AGCCGGTCGT AGCTGCTGTT CTACGCGGAA ACTAA
 
Protein sequence
MLENRKWVII GIFCLVGLTY LARLFYLQVL DDTYSLGASK NSIKRVVEIP YRGQIYDRNN 
QLIVYNTPVY DLYVTPKQVR IPDTSAFCRM MNISVSDFDS IMGLAKNYSP VKPSLFLRQL
SKEDFARIQD ALVDYRGFEP VISSMRTYPA HTLSNALGYV SEISKKQLDS QDILYYRQGD
YIGHNGLEEQ YEEQLRGRRG VKFMMQNVHG VNKGSWKNGA YDTLAVAGQN LITGIDVDVQ
KYADSLMQNK VGAVLAVEPA TGEILVSVSA PTYDPNLLSS RFFSKNYRAL LRNPYKPLIN
RPVMSSYRPG STFKLIQALI AQQQGSLLPT TVYGHAGSPM RCHCRGGNNL RGAVQNSCNP
YFYYVFRKFL YFNGEHNTFK ASAIGLKQWH DMAEKFGIGS KLGVDLPSEK KGNLPTPEYY
DKAYGGTLRW KFSNVYSLSI GEGELLISPL KLVNLAATIA NRGWFITPHY IKGFGKAGAG
LPAEYLERHE TGIDYKYYLP VIDGMRGAVA HGTVTPLANI AGIDLCGKTG TSQNNKFGHK
FDHSIFIGFA PMNNPKIAVA VFVENAGWGG KAAASVAALV AERYLKRKTE AKKLEEQVMA
SNYMPPISGL PVSKKPAPVS PKKDTTQHKP APVPKPLMTD TKAKPVVAAV LRGN