Gene Slin_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3139 
Symbol 
ID8726892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3807597 
End bp3808595 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content53% 
IMG OID 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003387949 
Protein GI284038019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTC AACAGATCGT ATTAGCATCG CGTCCCAAGG GGATGCCCGA TGCCAACACA 
TTTCGTATTG ACGACGTCAG CTTACCAGCG TTGCAGGCCG GAGATGTACG GGTTGAACCC
ACTTATTTCT CGGTAGACCC GTACATGCGG GGCCGGATGA ACGATGCTAA ATCGTATATA
CCCCCCTTTA AGGTTGAACA GCCATTAACG GGTGGGGCTG TGGGTAAGGT GCTGGAGAGC
AAAGCCGATA GTTTCGCCGT TGGTGATCTG GTGACGGGCA ATCTTCCTTG GGCCACGCAG
GCGGTTGTTG CGGCCAACGG GCTTAAGAAG ATAGATGCGA GTCTGGCCCC GGCCAGTTAC
TATCTGGGTA TTCTCGGTAT GCCGGGCCTG ACTGCCTATT TCGGTCTGCT GGATATTGGC
AATCCCCAGC CCGGCGAAAC GGTCGTAGTA TCGGGCGCGG CCGGTGCCGT CGGAATTATT
GTGGGGCAGA TTGCCAAGAT CAAGGGGTGC CGGGTTGTTG GCATTGCCGG TTCCGATGAT
AAAGTGGCTT TGCTGAAAGA AGAGTTCGGA TTTGATGAGG TAGTCAATTA TAAAACAGCC
ACTAACCTGA CCGAGGCCAT TGCCGATGCC TGCCCGAACG GAGTCGATGT GTACTTCGAT
AACGTTGGGG GAGAGGTTTC CGACGCTGTT ATCAATAATA TTAATTTTCA TGCCCGCATT
CCCCTGTGCG GTCAGATCGC GTTGTATAAT ACGACTGAGG TGCCCATGGG ACCCCGGATT
CAGCCCATGT TGCTGACCCG CAGTGTGCTG ATGAAAGGCT TTGTTATCGG CAATTACCAG
GCCCGTTTTG GCGAAGGAGC CAAGCAACTG GCAGCCTGGG TCAACGAAGG GAAACTTCGG
TATACCGAAA CGACGCTTAA AGGATTTGAT AAATTGCCTG AAGCCATGTT AGGCCTGTTT
TCCGGCCAGA ACACAGGTAA AATGATTGTG GAAGTTTAA
 
Protein sequence
MSIQQIVLAS RPKGMPDANT FRIDDVSLPA LQAGDVRVEP TYFSVDPYMR GRMNDAKSYI 
PPFKVEQPLT GGAVGKVLES KADSFAVGDL VTGNLPWATQ AVVAANGLKK IDASLAPASY
YLGILGMPGL TAYFGLLDIG NPQPGETVVV SGAAGAVGII VGQIAKIKGC RVVGIAGSDD
KVALLKEEFG FDEVVNYKTA TNLTEAIADA CPNGVDVYFD NVGGEVSDAV INNINFHARI
PLCGQIALYN TTEVPMGPRI QPMLLTRSVL MKGFVIGNYQ ARFGEGAKQL AAWVNEGKLR
YTETTLKGFD KLPEAMLGLF SGQNTGKMIV EV