Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3000 |
Symbol | |
ID | 8726751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3632676 |
End bp | 3633167 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | phosphodiesterase, MJ0936 family |
Protein accession | YP_003387810 |
Protein GI | 284037880 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.898077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCA TCGGATTTTT ATCGGACACC CATAGCTATC TGGACCCTCA GGTTTTCACT CATTTTGAAG CTTGCGATGA GGTCTGGCAT GCTGGCGATG TTGGCAATAT GGAGGTCGCC GATGCCTTAA AACGCTTTCG CCCTTTACGA ATTGTATGTG GTAACATTGA CAACGAATCA ATTGAGTTAC CCTTAAACCA ACGTTTTACG CTGGAAGGGT TCGACATCTG GATGACACAC ATTGGCGGAA CTCCCCCCAA TTACAATCCA ACCACGCGCC CACAACTCAA GGCAAGTCGA CCCGATATTT TCATCTGTGG CCATTCGCAT ATTCTTAAAG TTGTTCGCGA TCCAGCCATG AATAATTTAC TGTTCATGAA TCCTGGCGCA GCTGGCAAAA CGGGCTTTCA CAAAATGCGC ACCGTTTTAC GCTTTTCGCT CGACGCCGGT CGTATTCTGG ACATGCAGGT TATTGAGCTG GGTAAAAAGT AA
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Protein sequence | MTRIGFLSDT HSYLDPQVFT HFEACDEVWH AGDVGNMEVA DALKRFRPLR IVCGNIDNES IELPLNQRFT LEGFDIWMTH IGGTPPNYNP TTRPQLKASR PDIFICGHSH ILKVVRDPAM NNLLFMNPGA AGKTGFHKMR TVLRFSLDAG RILDMQVIEL GKK
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