Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2998 |
Symbol | |
ID | 8726749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3629514 |
End bp | 3630755 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | Na+ dependent nucleoside transporter domain protein |
Protein accession | YP_003387808 |
Protein GI | 284037878 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGCGTT TTACCGGCCT ACTAGGCATT GTTTTAATTC TGGGTATTGC TTATGCCCTT TCTGATAATC GTAAAGCCAT TAATTATCGT ACTGTTGGGG TAGGGCTTGC GCTTCAATTT GGTCTGGCTG TTTTCGTCTT AAAAACGGAC GTTGGACAGC GTCTCTTTCA GGGTCTTGGC TATTATGTTG ATCGATTGCT TCAAAAAGCC AATATTGGTG CCGAGTTCGT TTTCTCCTCT TTGGTGAGAC CGGATATACT TACAAGAGCT TTTGGCCCCG AGAACAGCTT TATTTTCTTC TTCAAGGTTG TTCCAACCAT CATTTTTGTA GCCGTTTTGG TCAACATTTT TTATCACCTT GGCATCATGC AGCGCATCGT GGCGGTGATG GCCAAAGCCA TGAAATGGTT GATGGGCGTG AGTGGAGCCG AAGCGTTGTC CAACGTTGCC AGTACATTTG TTGGGCAGGT AGAAGCGCAG ATCATGATTA AGCCGTACCT CAATGGCATG ACCAATTCTG AACTACTCGC CAGCATGACC GGTTCGTTTG CTTGTATAGC CGGGGGTGTA CTAGCGGTTT ACATTTCTTT GGGCGTGCCT GCCCCTTACC TACTGGCGGC CAGCATTATG GCTGCACCGG GGGCGTTGGT AATTAGCAAG ATTGTAATGC CGGAAACGCA GGTATCAGAA ACCCAGGGAA CGGTTAAAGT TGAAATCAAA AAAATCTACG CGAACCTGCT CGATGCCATT GCCGCTGGTG CTAGCGAAGG GCTTAAAGTA GGGTTTAATG TAGTGGCCAT GCTGATCGGT TTTATCGCTC TGATCGCACT GATCGATAGC CTGATGTTTC GCATAGGTTT CTACATTTTC AACGTCGATT TTCTGAGCCT TAACTACCTG CTTGGCAAAC TTTTCTCTCT GTTTGCCTGG GCAATGGGCG TACCAGCGAA AGACATCGAA GCCGCTGGTG CCCTGATGGG GACGAAAATG GTGGTTAATG AATTTGTTGC GTATCTGGAC TTAGTGAAGA TAAAGCAGAC GCTTGACCCT AAAACAATCG CTATCGTCAG CTTTGCTCTG TGTGGCTTTG CCAACTTTAG TTCGATTGCC ATTCAGGTCG GGGGCATTGG CGAACTAGCG CCAAAACGCC GGAGCGATCT GGCGCGCATT GGCTTCAAAG CACTTATTTG CGGTACGCTG GCAAGTTATA TGTCGGCTAC CATCGCTGGA TTGCTTTTGT AG
|
Protein sequence | MERFTGLLGI VLILGIAYAL SDNRKAINYR TVGVGLALQF GLAVFVLKTD VGQRLFQGLG YYVDRLLQKA NIGAEFVFSS LVRPDILTRA FGPENSFIFF FKVVPTIIFV AVLVNIFYHL GIMQRIVAVM AKAMKWLMGV SGAEALSNVA STFVGQVEAQ IMIKPYLNGM TNSELLASMT GSFACIAGGV LAVYISLGVP APYLLAASIM AAPGALVISK IVMPETQVSE TQGTVKVEIK KIYANLLDAI AAGASEGLKV GFNVVAMLIG FIALIALIDS LMFRIGFYIF NVDFLSLNYL LGKLFSLFAW AMGVPAKDIE AAGALMGTKM VVNEFVAYLD LVKIKQTLDP KTIAIVSFAL CGFANFSSIA IQVGGIGELA PKRRSDLARI GFKALICGTL ASYMSATIAG LLL
|
| |