Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2981 |
Symbol | |
ID | 8726732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3604400 |
End bp | 3606850 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | TonB-dependent receptor plug |
Protein accession | YP_003387792 |
Protein GI | 284037862 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.733063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTAC TGTTTACCTT TATTGTATTT GCTTGTCTTC TTAGTACCAC CTCCTTAATT GCCCAAACTA CCCTTACGGG TTTCGTTCGC GATGGAGCCA ACAAGCCTCT TCCCTTTGCC AGTATTGCGC TGCTCAATGC CAGAGATTCT ACCCTGGCCA AAGGCGGTAT TAGTAGTGAA ACCGGTACCT ACCAACTCAC GGGCGTCCGG GCCGGTCGCT ATGTAGTATC CGCCAGTGTG GTTGGCTACA AGACCCAAAA ATCACCCATT TTCGAGGTAA CTGCCGTGAA TACAGAAGCC CCTGTGCTGC TGTTAAGTGA GTCGGCGAAA ACACTAAACG AAGTAGCCAT AGTGGCTAAA AAACCGTTTG TTGAGCAGGA GATCGACCGG CTGGTTATTA ACGTTGCGGG CAGCATCATT GCCAGCGGCA GCACCGCCCT CGAAGTGCTG GAGAAAGCAC CTGGCGTCAC TGTCGACCGC CAGAACGATG CCCTGCAACT CCGCGGTAAA GATGGAGTCA TCGTGCAGAT AGACGGTAAG CAAACATACC TATCCATGCA GGATGTGGTA AACATGCTAA AGAATATGTC GAGCGATAAC ATCGAAAAAA TCGAACTCAT CACCAATCCT GGTGCCCGAT ACGATGCGTC GGGAAACTCA GGCATTATCA ATATCCGGCT GAAAAAGAAC AATAATATTG GTACCAATGG CACGGCATCA CTGGCGGGCG GGTCTGGGCG ATTCGACCGG GAGCGGGGTA GTCTGCAACT GAATCACCGG GAAGAGAAAG TTAACGTGTT TGGCAACTAT AGCCTGAACC GGGGTGGAAA CTATTTCGAT TTTAAAACCG ACCGCGACCA GCCTGCCCAG GGCGACGGCA CCGGCCCGAC GGCTGATTTG ACCCAGCGGA ACTTCGTACA ACAGGATACT TACCTGACAT TCCGGGATCT GGGCCAGAAT GCCAAGGCAG GCCTGGATTA TATGCCGTCC AAAAACACAA CGATAGGCGT AGCCTGGACG GCTTTCTGGA GTGAGCATGA TGAGCAGGGA CAAGCCAATG CTCTTTTTCG GCGCGGTGTC AACCAGCCGT TGTATTTGCA GACTGAAACA GAAAAAAACA TAGCGACGGT CGCCAGTAAT CAACTCGGCA ATCTCAATGT TCAGCATATG TTCGGATCAA CTGGTGGTCA GCTAAATGTG GATATTGATC TGGGACACTA CCAGCGGCAG TTTGCCAATA CGCTCGTTAC AAAAACGACG CTGGCGACAG ATGGGGCAGC GCATCCGATA GCCCTGCTCG ACAACCGGAT GCCAACAACC GTCGATATTC GAACAGCAAA GGCCGACTAT AGTCGAACCC TGCCCAGTAA ATGGAAGTTG GAAACGGGAT TGAAAAGTAC CTCGGTCAGC ACAGACAATA ACGTTACCAT ACAGACGGGA ACACCCGAGG CCTCCCAGGT CGACCCCAAA CAATCCAACC ATTTTCAGTA CACCGAGCAG GTGAATGCCG GGTACGTGAG TATGTCGGGA CAATGGGGAG CAAAAACCGA CGTGCAACTG GGGCTGCGCG CCGAACATAC ACATTCGGAA GGTAACTCAA TCACCCTCAA TAACATTGTT CGACGCGACT ACCTGAACAT CTTTCCCAGC CTGTTTATTT CGCGTCCGGT AGCCAAAAAC CAAACGATGA CCCTTTCGTA CAGCTACCGC ATTGACCGGC CCAATTACCA GAATCTCAAT CCCGCCCGTT CATTTGTCGA CCCCTACGCT TTTTCGCAGG GTAATCCATA CCTGAAACCC CAGTATACCC ATTCTCTCGA ACTGAAACAC GGATTCAACG GGAAAGTATT TACCTCGCTG GGGGCCAGCT TTACGAGTGA TCTGATTTTC AGTGTATCCT ATCCGCTAGA CGGCAACAAA GCCTATTTGA TTAGCCAGAA TATTGGCCAG TCGCAGGGGT ATAACCTCAC CGTGAGTTTT CCGGTAACGC TTACCAGGGG CTGGACGATG CAGACAACTG TGATGGGATA TTATAACCAG TTTGACTATA CCTATCAGGA CACCCCTCTT ACGCTCCGTC AAATTTCAGG TCGACTCAAT AGTTCGAGTG CTATTGTGCT GGGCAAGGGC TGGACGGCGG AGTTCAGCGG CCGGGTGAGC ACGCCAGGCG TAATGGCTGT CTGGACTGTT CCCTGGCTGG GCTCTATGGA TGCCGGTTTG CAAAAGACGG TTAGTGCCAA GCTGAAAGTG AAACTGAGCG TGCAGGATTT GTTGCATACC AACCTGGTGA TTGGGACGAT AAATGTCCCT ACCAGTATTC AGCATTTCCG TTACAGTCTG GATACACGGG TAGCGCTGGT AAATGTATCG TATGTATTCG GCAATCAGAA AGTGAAGGCC GCCCGTCAAC GGCGTACCGC TGCCGAAGAA GAAATGCAGC GAGCTAACTG A
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Protein sequence | MRLLFTFIVF ACLLSTTSLI AQTTLTGFVR DGANKPLPFA SIALLNARDS TLAKGGISSE TGTYQLTGVR AGRYVVSASV VGYKTQKSPI FEVTAVNTEA PVLLLSESAK TLNEVAIVAK KPFVEQEIDR LVINVAGSII ASGSTALEVL EKAPGVTVDR QNDALQLRGK DGVIVQIDGK QTYLSMQDVV NMLKNMSSDN IEKIELITNP GARYDASGNS GIINIRLKKN NNIGTNGTAS LAGGSGRFDR ERGSLQLNHR EEKVNVFGNY SLNRGGNYFD FKTDRDQPAQ GDGTGPTADL TQRNFVQQDT YLTFRDLGQN AKAGLDYMPS KNTTIGVAWT AFWSEHDEQG QANALFRRGV NQPLYLQTET EKNIATVASN QLGNLNVQHM FGSTGGQLNV DIDLGHYQRQ FANTLVTKTT LATDGAAHPI ALLDNRMPTT VDIRTAKADY SRTLPSKWKL ETGLKSTSVS TDNNVTIQTG TPEASQVDPK QSNHFQYTEQ VNAGYVSMSG QWGAKTDVQL GLRAEHTHSE GNSITLNNIV RRDYLNIFPS LFISRPVAKN QTMTLSYSYR IDRPNYQNLN PARSFVDPYA FSQGNPYLKP QYTHSLELKH GFNGKVFTSL GASFTSDLIF SVSYPLDGNK AYLISQNIGQ SQGYNLTVSF PVTLTRGWTM QTTVMGYYNQ FDYTYQDTPL TLRQISGRLN SSSAIVLGKG WTAEFSGRVS TPGVMAVWTV PWLGSMDAGL QKTVSAKLKV KLSVQDLLHT NLVIGTINVP TSIQHFRYSL DTRVALVNVS YVFGNQKVKA ARQRRTAAEE EMQRAN
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