Gene Slin_2900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2900 
Symbol 
ID8726651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3503352 
End bp3505004 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content53% 
IMG OID 
ProductCatalase 
Protein accessionYP_003387712 
Protein GI284037782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.478184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGA ACCAAAACGG TAATGGTCAA AACGGGCATA CACCCGGACC AGAATTCGGT 
GCCACCGGAC TTCAGCCACA AGACCAGCCC ACTGACCAGA CCTTAACGAC CAGGCAGGGT
CACCCGCTTA CCAACAACCA GAATGTTCGC ACAGTGGGTA ATCGTGGGCC AACCACGCTG
GAAAACTACC CTTTCCTCGA AAAAATAAGT CATTTCGACC GCGAGCGCAT CCCAGAACGC
GTTGTTCACG CCCGTGGGGC CGGTACACAC GGCGTTTTCG AAGCCTACGG AACCGTTGGC
GACGAGCCTG TTTCGAAATA CACCCGTGCC AAATTGTTTC AGGAGAAAGG AAAGCAAACG
CCGGTTTTCG TACGTTTCTC ATCCGTTATT CACGGTGGTC ATTCGCCCGA AACCCTCCGC
GACCCACGTG GTTTTGCCGT GAAATTTTAC ACCGAAGAGG GTAACTGGGA TCTGGTTGGC
AACAACCTGA AAGTGTTCTT TATTCGCGAT GCGATGAAGT TCCCCGACAT GGTACACGCT
CTGAAGCCAG ACCCAATAAC AAACCGGCAG GACGGCGGAC GTATTTTCGA TTTTATGAGC
AATACGCCCG AGTCGGTCCA TATGCTCACC TTCTTATTTT CACCCTGGGG TATTCCGGCC
AACTACCGGC AGATGCAGGG CTCAGGTGTG AACACCTACA AATGGGTGAA TGAACAGGGT
GAAGGCGTAC TGATCAAGTA CCACTGGGAA CCTAAACAGG GAATCAAGAA TCTGACCCAG
CCCGAAGCCG AGCAGATTCA GGGTAAAAAC TTTAACCATG CTACCCAGGA TTTGTATGAC
GCCATTGAAG CCGGAAATTT CCCCCAATGG GAGCTTCTGG TTCAGATTAT GAGCGACGAC
GAGCACCCTG AACTTGACTT CGATCCGCTC GATGATACAA AGCTGTGGCC GCAGGAGCAG
TTTCCGTGGT TGCCGGTGGG GATGATGACG CTCAACAAAA ACCCGGAGAA TTATTTCCAC
GAGGTAGAGC AGGTTGCTTT TGGAACAGGG GTGCTGGTCG ATGGGCTGGA CTTCTCCGAC
GACAAAATGC TTCAGGGCCG TACCTTCTCC TATTCAGATA CGCAGCGTTA CCGTGTGGGT
ACCAATTACC TGCAACTGCC CATCAATGCC CCGAAAAAAC ATGTGGCAAC AAACCAGCGC
GACGGCCAGA TGCAATACCG CGTTGACACC GCACCGGGGC AGAATAAGCA CGTCAATTAC
GAGCCGTCGT CCATGAACGG CCTGAAAGAA GCGCCCCGGA CGTATCCCGA TCATAAGCCT
TACATTTCGG GAAACCTAAT GCGCCAGCCA ATTGACCGGA CCAATAACTT CAAACAGGCG
GGAGAACGTT ACCGTACATT TGAGGACTGG GAACGCGATG ATCTGATCAA TAATCTGGTT
GCCAATCTAT CGGGCGCTCA GCAAAATGTT CAGGATAAAA TGGTTGAACT GTTCAGTCAG
TGCGACGAGG ATTATGGTCG GCGCGTGAAG GAAGGCCTGC AAAAAGTAGC AAACGGCACA
GGCGAGCAAC TACACGGCCA GGCAAATACC CAGGTTGGGC AGGAAGCTGC GCAACAGGCC
GAGGAATTGG CCCACGAAGC CAAACCCTAT TAA
 
Protein sequence
METNQNGNGQ NGHTPGPEFG ATGLQPQDQP TDQTLTTRQG HPLTNNQNVR TVGNRGPTTL 
ENYPFLEKIS HFDRERIPER VVHARGAGTH GVFEAYGTVG DEPVSKYTRA KLFQEKGKQT
PVFVRFSSVI HGGHSPETLR DPRGFAVKFY TEEGNWDLVG NNLKVFFIRD AMKFPDMVHA
LKPDPITNRQ DGGRIFDFMS NTPESVHMLT FLFSPWGIPA NYRQMQGSGV NTYKWVNEQG
EGVLIKYHWE PKQGIKNLTQ PEAEQIQGKN FNHATQDLYD AIEAGNFPQW ELLVQIMSDD
EHPELDFDPL DDTKLWPQEQ FPWLPVGMMT LNKNPENYFH EVEQVAFGTG VLVDGLDFSD
DKMLQGRTFS YSDTQRYRVG TNYLQLPINA PKKHVATNQR DGQMQYRVDT APGQNKHVNY
EPSSMNGLKE APRTYPDHKP YISGNLMRQP IDRTNNFKQA GERYRTFEDW ERDDLINNLV
ANLSGAQQNV QDKMVELFSQ CDEDYGRRVK EGLQKVANGT GEQLHGQANT QVGQEAAQQA
EELAHEAKPY