Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2748 |
Symbol | |
ID | 8726498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3322601 |
End bp | 3323536 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003387562 |
Protein GI | 284037632 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00012747 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATTCAAC ACAACGAGAA CCCAGGGATG GCTCAGAATA TGTACTCTGA CGAGGAATTA ATCACCCATT TTCCTGGCTT TACCAACCAG TATGCAACCG TAAACGGGGT GCGGCTGCAT TATGTCGAAG GTGGGACAGG CATACCTTTG GTTTGTTTAC CGGGCTGGCC GCAAACCTGG TATTCTTACA AGCCTGTTGC GGTAGAACTG GCCAAAACGT ACCGTGTCAT TATTGTCGAC ATAAGAGGGA TGGGTAGCTC CGAAAAGCCC CAATCCGGCT ACGATAAGAA AACAATGGCC GCCGATATTG CCGCCTTGTT ACAGCAGTTG GGCCTGACAA ACGTTCATCT TATGGGCCAC GACATCGGCG GCATGGTAGC CATGAGTTTT GCGTTTAACT ATCCCCAATT CACCCAAAAG CTGATTGTCC TGGATGGCTC GCATCCCAGC GAAGGCCTGA TGCAGATGAG TTTGATACCC CCTCGGGGTA CGTTTGCCGG GAAGATGGAT GCCGATAGAC CCTACGCCTG GTGGATGGGA TTCAATCAGG TAAAAGAATT GCCGGAAAAG ATACTGGCCG GGCGATTCCA GTACTTGCTG GACTGGCTTT TTCAGTATGT CATGATTGAC GACAGCAAGA TGTCTCCTCT GGAAAGAGCG GTATATGCCA GTTCGTATAA TGACGCCGAG AGCATCCGGG CAGCGAATGC GTGGTATCAA ACATTTCAGC AGGATATAGA CGATGCCCAA ACGTATCAGC CGCTTGCCAT GCCGGTGTTA GGCATCGGAA GCTATGTGAG TTACAACTAC ATGAAGATGG GATTGCCTTA TGTAGCCAAA GACGCACAAG TGGTTGGAAT TTTAGACAGT GGTCATTACC TGTTTGAAGA GCGGCCCGCC CAGGTGCTTG ACGCAGTTTT GCGGTTTCTT GCCTGA
|
Protein sequence | MIQHNENPGM AQNMYSDEEL ITHFPGFTNQ YATVNGVRLH YVEGGTGIPL VCLPGWPQTW YSYKPVAVEL AKTYRVIIVD IRGMGSSEKP QSGYDKKTMA ADIAALLQQL GLTNVHLMGH DIGGMVAMSF AFNYPQFTQK LIVLDGSHPS EGLMQMSLIP PRGTFAGKMD ADRPYAWWMG FNQVKELPEK ILAGRFQYLL DWLFQYVMID DSKMSPLERA VYASSYNDAE SIRAANAWYQ TFQQDIDDAQ TYQPLAMPVL GIGSYVSYNY MKMGLPYVAK DAQVVGILDS GHYLFEERPA QVLDAVLRFL A
|
| |