Gene Slin_2713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2713 
Symbol 
ID8726463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3282910 
End bp3284115 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content40% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387528 
Protein GI284037598 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.173393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGT TGACAGTAAA GAACGTCGGC CCAATTAAAG AGGCTGAGTT AGAGGTCAAA 
AAACATACAG TATTTATTGG TCCGCAGGGG TCAGGAAAAA GTACGCTGGC GAAGTTGATT
GCGATTTTAT CCTCAACAGA GTCAGAGAAG CTGACATCAA CTACTTTAAC TGATTATAAC
ATCCAGAACT ATATCTCCGT AGACTCAACT GTGAGTTTCA GTGTTGACAG ATATAAAGCT
TCTCTCAAGA ATAAAGAATT AACTTACTCG CTCACTAATC ATGAAGGCAC TATAGTTAAT
CAGATTGCTG TTTTACCCGA TGCTGAATCG AAGCATACCG GTTGGCCAAC TAAATCCTTC
GACCTATTTA GCGGATTAGA ATCGCAACTT AAATACATAG ATGATTCCCA AATTCCTGAC
TCTATAAAAG AACTGCTGTT AAGGCTTAAA AGTATTTCTA ATCAATGGAT TGAATCCGGT
GCCTTGAATG GAGAATATAT TCCATCAGAG CGCACTTTGC TTGCTGTATT GTCCAAATCC
ATCTGGAATC TTATAAAGTC AAATATAGAC TTCCCCAAAG TCATACTATC GTTTGCCAGT
GACTTTGAAA GTATTCGTAA TAAGACATTG AAACTATACA TCCCTTTTTT AAATATTTCT
TACGAACATA GTCAAGGTGA AGATATATTA ATACACGAAA ACGGACCAAT AAGCTTAAGC
GAGAGTGCAA GTGGTTATCA ATCTATTATC CCACTATTAA TGGTTGTTGA ACATCAACGC
CAACAATCGA AACGTCGCTT TATCATTGAA GAACCTGAAC TCAACCTCTA CCCCACCGCC
CAAAAAGACC TCATTTACAG CTTAATGGGT GGTCTTCAAC CTAATATTGA GTACAAAGAA
GCGGAGTGGG TTATCACCAC GCATAGTCCC TATGTACTTA GCTCGTTCAA TACGCTCATG
CTGGCGTATA AAGTAGCCCA GCGTAGTGAG GAATTAAAGG CTGAAGTTGA AAAAATCATA
CCCGCCCGGT GCTGGATCAA TCCAGAAGAC TTTGCCGCTT ACTATGTAGA TGGCGGTACC
GTTCGAAGCA TAATTAGTGA AAAAACCGGC CTGATTGCCG ACAATGAACT CGACGATGTG
TCAGATGACT TAGCTGACGA ACAAGATAAA TTATTCGCCC TTAGCCGTAG CGTTCCCCGT
GATTGA
 
Protein sequence
MAKLTVKNVG PIKEAELEVK KHTVFIGPQG SGKSTLAKLI AILSSTESEK LTSTTLTDYN 
IQNYISVDST VSFSVDRYKA SLKNKELTYS LTNHEGTIVN QIAVLPDAES KHTGWPTKSF
DLFSGLESQL KYIDDSQIPD SIKELLLRLK SISNQWIESG ALNGEYIPSE RTLLAVLSKS
IWNLIKSNID FPKVILSFAS DFESIRNKTL KLYIPFLNIS YEHSQGEDIL IHENGPISLS
ESASGYQSII PLLMVVEHQR QQSKRRFIIE EPELNLYPTA QKDLIYSLMG GLQPNIEYKE
AEWVITTHSP YVLSSFNTLM LAYKVAQRSE ELKAEVEKII PARCWINPED FAAYYVDGGT
VRSIISEKTG LIADNELDDV SDDLADEQDK LFALSRSVPR D