| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2568 |
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| Symbol | |
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| ID | 8726313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3104444 |
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| End bp | 3106882 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | Soluble ligand binding domain protein |
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| Protein accession | YP_003387385 |
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| Protein GI | 284037455 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.171347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACTTC CAGGTGGCAC TACGGGAATA CCCGCAAGCG CTATACCGAA AGGAGTTAAC
CCCGCTAATT TGCCGGCTAA CGTGAGGCAG CAGGTTAACG GCAAAACCAG CCAACCCCGG
ACTACGACTA CAGGTCGTAC GTCGCCTACC TCACAAACGC TTAAAGACAG AAAACAGGGT
GTCAATGCTG CTAATGCTAC CAATCAGCAG GTCACCCCGG GAGATACAAC CGCCCCCGGA
CCTGTCTCCG ACGAGGAAGT TATCCGGGAA GGAGCCGAAC GCGCACAACG TCGTGAACAG
CAGGAAAAGC GCCAGAGAAC GTTTGGTTAT TCGCTCTTCA ACGATCCGGC TATGGAGCGC
ACTTTCGAAC CTAATCTGAA CATAGCTACC CCCCGAAACT ACGTTGTAGG ACCCGGCGAT
CAGCTCAATA TCCAGATGTA TGGGTATTCG GAAATTGACT TTTCACAAAC CGTTTCATCA
GATGGTAATG TCTATTTCGG ACAGTCGACC GGTGTTGGCC CGGTTTCCGT GGCCGGCCTA
ACAATCGAAC AGGCCAAAGC GCGGATCATC GGTCGGCTGA GCAAGCGGTT TGCTGGCTTG
CGCAGTTCCC AGTATGGCCC GCAGAATACA TTCCTTGAAG TATCGCTCGG CGGAACGATA
CGGAGTATAC GCGTAACGGT TACGGGCGAT GCCGTTCGGC CGGGAACGTA CACACTTTCG
TCACTGGCAA CGGTCATGAA TGCCGTCTAT CAGGCTGGTG GCCCAAATGA CATTGGCTCT
TATCGCCGGG TACAGCTTAT CCGGAATAAT AAAGTAGCAG CCACCCTCGA CTTGTATGAT
TACCTGCTGA GTGGCATTCA GCGCAACGAC CTCCGCCTGC AGGATAACGA CAATATCCGA
TTTACAACCT TCCTTGAGAA AGTGGAGATT ACCGGTACCG TAAAACGTGC CAATATTTTT
GAAATGTTAC CGGGCGAAAC CCTCGACCGG CTTCTGTTTT ATGCGGGTGG TTTTGCGGCT
CAGGCGTACA AAAACAGACT CAAGGTTACC CGACTGACCG ATCGTGAAGT AAAAGTGATT
GACGTAACAA CGCCCGAGTT TAAAACCTTT GAGATTCAGG ATGGTGATCT GGTCACGGTT
TCCCGTCTGC TTGAGCGTTT CGAAAACCAG ATTACCATTG AAGGGGCTGT GTTTCGCCCT
GGACAATACT CGCTCGATAA GAACCGAACG CTGAAAGAAC TCATTACCAA TGCCGAGGGG
CTGAAGGGCG ATGCCTTTAC CGGCCGTGTT ACAATCGTTC GCACCCGGGA AGATCTGGCT
ATCGAAAATC TCTCCGTTAA TCTGGCCAAC ATCCTGGCGG GTAACGAGCC TGACGTACCG
CTGCAACGCG AAGACCAGGT TATCGTGCCA TCCCGCTTTG ATCAGGTGGA GCAGGCAACC
ATTTCCGTGC AGGGGGAAGT CAACATGCCC GATACAGATA TTCCTTATAT TGCCAACATG
ACCCTGAACG ATGTACTGTT GCGTACAGGC GGTTTAAAAG AATCGGCGGC TGCGTCCATG
GTTGAAGTGG TTCGTCGCAA GAAAGACGCC GACCCCCGTT CTCCAACGGC GCAGATTGCA
GAAACCTTCC GGTTCAACGT AGACCGTGAC TTATCGATCG GAGCAGATGC GAACAAGAAT
TTTATTCTAC AGCCCTTTGA TCAGATCATC GTTCGTCGGT CGCCCAACTA CGCCATTCAA
ACATATGCGT ATGTGGCCGG TGAAGTCATT CTGCCAGGCT CCTACCCAAT TCGGTCTAAA
GACCAGAAAG TGTCGGATCT GGTAGCCCAG GCAGGTGGTT TAACGTCTCA GGCTTATGTA
GAAGGAGCAA CGCTGGTCCG CCCGGTTAAA CTGAGCGCTG ACGAGCTGAA ACGGAAGCAA
AAGGCAATTG AAGAAGTGGC CGACAATACA ACCAAAACGA TTGTGGAAAC GGAAGTCGTT
ACGCCGAACG TTGCCGAAGC GATTGGTATC AATTTGAAGA AGATTCTGGC AAAACCCGGC
TCATCGGAAG ACATTCTGCT ACAGGAAGGA GATACATTAC GTATTCCAAA ATTGCTCGAA
ACAGTGCGAA TTCAGGGTGA AGTACAATTG CCGAATACAG TCAAATTCCG GGAGGGAGAA
ACGTTCCAGG ACTATATTTC ACAAACGGGT GGCTTCACGT CGAAATCACA GCGTCGCCGG
GCATTTATCA TCTATGCCAA CGGCTCGGTT GATCGGACCC GGAAATTCAT GTTTTTCAAT
GTGTATCCGC GTGTTGAGCC AGGCTCTGAG ATTGTGATCC CTAAACGGGC GACTACGCCA
CTTACGGCAC AGCAGATTCT GAGTTCGACG GTTGGTATCG CCGGCTCGTT ATTAACACTT
GTTACAACCC TGATCTTACT GACCCGGGTT AGCAACTAA
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| Protein sequence | MGLPGGTTGI PASAIPKGVN PANLPANVRQ QVNGKTSQPR TTTTGRTSPT SQTLKDRKQG
VNAANATNQQ VTPGDTTAPG PVSDEEVIRE GAERAQRREQ QEKRQRTFGY SLFNDPAMER
TFEPNLNIAT PRNYVVGPGD QLNIQMYGYS EIDFSQTVSS DGNVYFGQST GVGPVSVAGL
TIEQAKARII GRLSKRFAGL RSSQYGPQNT FLEVSLGGTI RSIRVTVTGD AVRPGTYTLS
SLATVMNAVY QAGGPNDIGS YRRVQLIRNN KVAATLDLYD YLLSGIQRND LRLQDNDNIR
FTTFLEKVEI TGTVKRANIF EMLPGETLDR LLFYAGGFAA QAYKNRLKVT RLTDREVKVI
DVTTPEFKTF EIQDGDLVTV SRLLERFENQ ITIEGAVFRP GQYSLDKNRT LKELITNAEG
LKGDAFTGRV TIVRTREDLA IENLSVNLAN ILAGNEPDVP LQREDQVIVP SRFDQVEQAT
ISVQGEVNMP DTDIPYIANM TLNDVLLRTG GLKESAAASM VEVVRRKKDA DPRSPTAQIA
ETFRFNVDRD LSIGADANKN FILQPFDQII VRRSPNYAIQ TYAYVAGEVI LPGSYPIRSK
DQKVSDLVAQ AGGLTSQAYV EGATLVRPVK LSADELKRKQ KAIEEVADNT TKTIVETEVV
TPNVAEAIGI NLKKILAKPG SSEDILLQEG DTLRIPKLLE TVRIQGEVQL PNTVKFREGE
TFQDYISQTG GFTSKSQRRR AFIIYANGSV DRTRKFMFFN VYPRVEPGSE IVIPKRATTP
LTAQQILSST VGIAGSLLTL VTTLILLTRV SN
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