| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2566 |
|---|
| Symbol | |
|---|
| ID | 8726311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 3100959 |
|---|
| End bp | 3102032 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | chorismate mutase |
|---|
| Protein accession | YP_003387383 |
|---|
| Protein GI | 284037453 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTAG AGTCTCTCCG TAATGACATT GATGCGCTCG ATGATCAACT CCTGACGTTA
CTGAATCAAC GAATGGAACT TGTGCGCCGG GTTGGCGACC TCAAACGTAC AACCAATACG
GTCATTTACC GGCCGGAGCG TGAGAAGCAA ATTCTGGACC GGCTTCATGA GCAAAACGAT
GGTTTGCTGA ACCGTTCGGC CATTGAAGCG ATCTTTCTTG AAATCTTCGC TGTATCCCGT
AACCTTGAGT TGCCCGAACG AGTGGCTTAC CTAGGTCCTG AAGGTAGCTT TACGCACCAG
GCGGCCGAAA GCCGGTTTGG AGCCATGAGC GCCTATATGG CCCTGCCAAC AATCCGGTCG
GTATTTGAAA GTGTCGAAAC AGGGCGGGTT CGGTTTGGCG TTGTGCCCAT CGAAAACAAC
CAGGAAGGGG TTGTAGAGGA AGCCATCGAT CTGCTGCTGG AGAAAGACCT CAGAATTGCC
GCCGAAGTGC AGATTCCGGT GCATTTTACC TTTGCCACGA AAGCCGAGAA TTTAGCCGAC
ATCACCCACA TCTATTCAAA AGATATCGCT TTCCGGCAGT GCAGCCGGTT TCTGAACGAT
TATTTCGATG AGCTGAAAGC TGAGATGGTG CCGGTCGAAT CGACATCGAA GGCGGCTAAA
ATGGCCGCTC AACAACCCAA TACGGCAGCG ATCTGCTCGC ATATTGCCGC CAAGTTGTTC
GACGTGCCGG TGCTGTTCGA CAATATTGAA GATAGTGACC TGAACCGAAC CCGGTTTTTG
ATTCTGGCTA AGGATTTTGT GAATCAGCCC AGTGGGCACG ATAAAACCAC TTTAATTGCC
CGCCTACCGA ATACCCAGTC GCCGGGGGTA CTCGCCGAAT TCCTACAGGA GTTTAACACC
CGTAATATTA ATCTGACAAA GATCGAAAGT CGGCCTTTGC GGGATGGGGC TACTTTCCGC
TACTGGTTCC TGCTCGAATG CGAAGGCCAC GCCAGTGACC CCGATTTGCA CGAGATATTG
AATCACCACG CGGCTGAGGT CAAGTTGCTG GGCAGTTATG TGCGCGTAAG CTAA
|
|---|
| Protein sequence | MTLESLRNDI DALDDQLLTL LNQRMELVRR VGDLKRTTNT VIYRPEREKQ ILDRLHEQND
GLLNRSAIEA IFLEIFAVSR NLELPERVAY LGPEGSFTHQ AAESRFGAMS AYMALPTIRS
VFESVETGRV RFGVVPIENN QEGVVEEAID LLLEKDLRIA AEVQIPVHFT FATKAENLAD
ITHIYSKDIA FRQCSRFLND YFDELKAEMV PVESTSKAAK MAAQQPNTAA ICSHIAAKLF
DVPVLFDNIE DSDLNRTRFL ILAKDFVNQP SGHDKTTLIA RLPNTQSPGV LAEFLQEFNT
RNINLTKIES RPLRDGATFR YWFLLECEGH ASDPDLHEIL NHHAAEVKLL GSYVRVS
|
|---|
| |