| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2552 |
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| Symbol | |
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| ID | 8726297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3085358 |
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| End bp | 3086050 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003387369 |
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| Protein GI | 284037439 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000276879 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.180215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA TACTAATTAT TGAAGACGAT CGTCGTATTG CCCAGAACAT TAGCCGGACG
CTACAGGAAG ATGGCTATGC AACGGAGGTG GTTTATGAAG GGATTAACGG CCGTCAGATG
GCGTTGCAAC CGGGCGTCGA TCTGCTGATT CTGGATATCA ATCTGCCCGG TATCAACGGA
TTTGAAGTGT GCCGCAGCGT TCGGGCAGAA AAGCCCAATC TCCCCATTAT TATGCTGACG
GCATTGGGCG AGATCGAAGA TAAAGTAGAA GGATTGGGGC TGGGCGCTGA CGACTATCTG
GTCAAACCCT TTGATATCCG GGAATTAATT GCCCGTGTGG AGGCCTGCCT GCGCCGGTCA
ACCTTGCTGG AGGAAATGAC TGCCGAGCCG GAGAAAGTAT GGCGGGTGGC TAACTTAACC
GTCGATTCAG CGTCCCGCGA GGTGAAACGG GGAGAAACTA CCATCGACTT GACCGCCCGC
GAGTTCGCTC TGCTGGAATA CCTGATTCGT AACCGGGGAC GGGTGATGGC AAAACTGGAT
ATTACCGAGC AGGTCTGGAA TCTAAATTTC GACCCTACTA CCAATGTCGT AGAGGTGTAT
ATCAACTACC TCCGTAAAAA GATCGATCGG GATTTTGAAC CCAAGCTCAT ACACACGAGG
CCGGGTATGG GCTATGTACT TAAAGAGGAG TAG
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| Protein sequence | MKKILIIEDD RRIAQNISRT LQEDGYATEV VYEGINGRQM ALQPGVDLLI LDINLPGING
FEVCRSVRAE KPNLPIIMLT ALGEIEDKVE GLGLGADDYL VKPFDIRELI ARVEACLRRS
TLLEEMTAEP EKVWRVANLT VDSASREVKR GETTIDLTAR EFALLEYLIR NRGRVMAKLD
ITEQVWNLNF DPTTNVVEVY INYLRKKIDR DFEPKLIHTR PGMGYVLKEE
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